RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB14803", tax_kingdom = "Pseudomonadati" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 2 ✖

tax_kingdom 1

  • Pseudomonadati · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB14803 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18837580 18837580 PRJEB14803_P_NODE_1035_length_1352_cov_5.686409_g880_i1 PRJEB14803 1035 1352 5.686409 76.88024968 Balneolales bacterium 2497613 Bacteria Bacteria 197 8.23e-54   NR HKJ30596.1 2497613 g880 i1 35.3 1.8594674556213 439 220 84.8 20 66 1211 12 443 HKJ30596.1 phosphatidylinositol-specific phospholipase C domain-containing protein [Balneolales bacterium] diamond 2514 197 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales     Balneolales bacterium
31132244 31132244 PRJEB14803_P_NODE_24795_length_224_cov_1.481481_g24329_i0 PRJEB14803 24795 224 1.481481 3.31851744 Gracilimonas 649462 Bacteria Bacteria 62 4.58e-9   NR WP_103664830.1 1749045 g24329 i0 55.8 4.60714285714286 43 19 57.6 0 174 46 416 458 WP_103664830.1 M28 family metallopeptidase [Gracilimonas amylolytica] diamond 1032 62 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Gracilimonas Gracilimonas amylolytica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;