RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB14803", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJEB14803 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27885945 27885945 PRJEB14803_P_NODE_28545_length_204_cov_1.656805_g28079_i0 PRJEB14803 28545 204 1.656805 3.3798822 Candidatus Cybelea sp. 2952917 Bacteria Bacteria 49.3 1.08e-4   NR HEY2476458.1 2952917 g28079 i0 46.7 0.661764705882353 45 24 66.2 0 2 136 303 347 HEY2476458.1 prolyl oligopeptidase family serine peptidase [Candidatus Cybelea sp.] diamond 135 49.3 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Cybelea Candidatus Cybelea sp.
27885973 27885973 PRJEB14803_P_NODE_45645_length_153_cov_1.694915_g45179_i0 PRJEB14803 45645 153 1.694915 2.59321995 Candidatus Eremiobacteraceae bacterium 3069296 Bacteria Bacteria 55.8 2.51e-7   NR HLJ82683.1 3069296 g45179 i0 55.3 0.92156862745098 47 21 92.2 0 149 9 188 234 HLJ82683.1 arginine deiminase family protein [Candidatus Eremiobacteraceae bacterium] diamond 141 55.8 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Candidatus Eremiobacterales Candidatus Eremiobacteraceae   Candidatus Eremiobacteraceae bacterium
28075346 28075346 PRJEB14803_P_NODE_5265_length_604_cov_140.239016_g4861_i0 PRJEB14803 5265 604 140.239016 847.04365664 Candidatus Elarobacter sp. 3047550 Bacteria Bacteria 122 4e-31   NR HEX3469537.1 3047550 g4861 i0 41 0.799668874172185 161 83 77.5 7 548 81 38 191 HEX3469537.1 hypothetical protein [Candidatus Elarobacter sp.] diamond 483 122 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Elarobacter Candidatus Elarobacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;