RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where bioproject = "PRJEB14803", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 9 ✖

tax_kingdom 1

  • Bacillati · 9 ✖

bioproject 1

  • PRJEB14803 · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2571373 2571373 PRJEB14803_P_NODE_36423_length_175_cov_2.064286_g35957_i0 PRJEB14803 36423 175 2.064286 3.6125005 Armatimonadota bacterium 2033014 Bacteria Bacteria 73.2 2.24e-13   NR MBI3921637.1 2033014 g35957 i0 69.6 0.96 56 14 96 2 173 6 104 156 MBI3921637.1 alcohol dehydrogenase catalytic domain-containing protein [Armatimonadota bacterium] diamond 168 73.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
5123944 5123944 PRJEB14803_P_NODE_46325_length_152_cov_1.367521_g45859_i0 PRJEB14803 46325 152 1.367521 2.07863192 Armatimonadetes bacterium Uphvl-Ar1 2004467 Bacteria Bacteria 60.2 7.43e-5   NTclustered gi|1199098093|gb|CP021423.1| 2004467 g45859 i0 78.652 0.585526315789474 89 19 59 0 2 90 1549504 1549592 Armatimonadetes bacterium Uphvl-Ar1 genome blastn 89 60.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium Uphvl-Ar1
27601989 27601989 PRJEB14803_P_NODE_23504_length_232_cov_1.690355_g23038_i0 PRJEB14803 23504 232 1.690355 3.9216236 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 53.5 5.14e-6   NR MCW3101384.1 2739509 g23038 i0 44.3 0.788793103448276 61 34 78.9 0 23 205 712 772 MCW3101384.1 uncharacterized protein [Chthonomonadaceae bacterium] diamond 183 53.5 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
28732108 28732108 PRJEB14803_P_NODE_27447_length_209_cov_2.287356_g26981_i0 PRJEB14803 27447 209 2.287356 4.78057404 root 1 Root_unresolved Root_unresolved 42 0.0441   NR CAA9235529.1 157466 g26981 i0 35.8 1.82296650717703 67 43 96.2 0 208 8 8 74 CAA9235529.1 hypothetical protein AVDCRST_MAG63-1175 [uncultured Armatimonadetes bacterium] diamond 381 42 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
29875248 29875248 PRJEB14803_P_NODE_3151_length_804_cov_1.915475_g2821_i0 PRJEB14803 3151 804 1.915475 15.400419 Armatimonadota bacterium 2033014 Bacteria Bacteria 338 1.1899999999999997e-110   NR MBC8100959.1 2033014 g2821 i0 62.9 9.98134328358209 267 98 99.6 1 4 804 194 459 MBC8100959.1 phytoene desaturase [Armatimonadota bacterium] diamond 8025 338 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30601744 30601744 PRJEB14803_P_NODE_6153_length_551_cov_1.465116_g5719_i0 PRJEB14803 6153 551 1.465116 8.07278916 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 48.9 0.00477   NR MCS7272690.1 2682145 g5719 i0 38.8 0.462794918330309 85 42 45.7 2 299 48 75 150 MCS7272690.1 carboxypeptidase regulatory-like domain-containing protein [Fimbriimonadales bacterium] diamond 255 48.9 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
31233590 31233590 PRJEB14803_P_NODE_32895_length_187_cov_1.296053_g32429_i0 PRJEB14803 32895 187 1.296053 2.42361911 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 42.7 0.0173   NR MEX2243768.1 2682144 g32429 i0 35.1 0.914438502673797 57 37 91.4 0 179 9 452 508 MEX2243768.1 hypothetical protein [Fimbriimonadaceae bacterium] diamond 171 42.7 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
31385677 31385677 PRJEB14803_P_NODE_1956_length_1028_cov_2.587110_g1708_i0 PRJEB14803 1956 1028 2.58711 26.5954908 Bacillati 1783272 Bacteria Bacteria 137 1.01e-31   NR MEQ1932693.1 2682144 g1708 i0 38.8 3.58949416342412 325 176 88.1 11 1 906 311 635 MEQ1932693.1 choice-of-anchor D domain-containing protein [Fimbriimonadaceae bacterium] diamond 3690 138 0.992753623188406 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
31518530 31518530 PRJEB14803_P_NODE_17836_length_279_cov_2.315574_g17370_i0 PRJEB14803 17836 279 2.315574 6.46045146 Capsulimonas corticalis 2219043 Bacteria Bacteria 55.5 1.89e-6   NR WP_165864418.1 2219043 g17370 i0 37.5 0.946236559139785 88 48 94.6 1 8 271 470 550 WP_165864418.1 RICIN domain-containing protein [Capsulimonas corticalis] diamond 264 55.5 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas Capsulimonas corticalis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;