RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB14803" and tax_clade = "Provora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Provora · 4 ✖

bioproject 1

  • PRJEB14803 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12775175 12775175 PRJEB14803_P_NODE_91_length_2781_cov_1723.271304_g77_i0 PRJEB14803 91 2781 1723.271304 47924.17496424 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 213 1.25e-49   NTclustered gi|1315028866|ref|NC_036491.1| 2044563 g77 i0 85.93 8.28263214670982 199 28 7 0 2247 2445 9562 9760 Ancoracysta twista mitochondrion, complete genome blastn 23034 213 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista
16598204 16598204 PRJEB14803_P_NODE_154_length_2512_cov_1018.327412_g77_i1 PRJEB14803 154 2512 1018.327412 25580.38458944 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 213 1.13e-49   NTclustered gi|1315028866|ref|NC_036491.1| 2044563 g77 i1 85.93 9.16958598726115 199 28 8 0 337 535 9760 9562 Ancoracysta twista mitochondrion, complete genome blastn 23034 213 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista
21698098 21698098 PRJEB14803_P_NODE_20518_length_254_cov_4.904110_g20052_i0 PRJEB14803 20518 254 4.90411 12.4564394 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 174 4.72e-39   NTclustered gi|1280963087|gb|MG202010.1| 2044563 g20052 i0 79.771 46.6338582677165 262 36 100 14 1 254 7050 7302 Ancoracysta twista strain TD-1 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 11845 174 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista
29622108 29622108 PRJEB14803_P_NODE_32610_length_188_cov_1.294118_g32144_i0 PRJEB14803 32610 188 1.294118 2.43294184 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 102 6.11e-25   NR ATY40842.1 2044563 g32144 i0 71 1.97872340425532 62 18 98.9 0 188 3 56 117 ATY40842.1 holocytochrome c synthase, partial [Ancoracysta twista] diamond 372 102 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;