RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB14803", tax_clade = "Methanomada group" and tax_phylum = "Methanobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Methanomada group · 2 ✖

bioproject 1

  • PRJEB14803 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30127599 30127599 PRJEB14803_P_NODE_15412_length_307_cov_3.672794_g14946_i0 PRJEB14803 15412 307 3.672794 11.27547758 Methanobacteriaceae archaeon 2099680 Archaea Archaea 111 1.11e-26   NR MBX7076500.1 2099680 g14946 i0 80.3 3.88925081433225 66 13 64.5 0 108 305 12 77 MBX7076500.1 elongation factor Tu [Methanobacteriaceae archaeon] diamond 1194 111 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon
32271432 32271432 PRJEB14803_P_NODE_10638_length_392_cov_1.380952_g10173_i0 PRJEB14803 10638 392 1.380952 5.41333184 root 1 Root_unresolved Root_unresolved 62.4 2.73e-8   NR MBR1611664.1 66852 g10173 i0 35.8 5.46428571428571 123 67 94.1 3 14 382 482 592 MBR1611664.1 hypothetical protein [Methanobrevibacter sp.] diamond 2142 62.8 0.993630573248408 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;