RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB14803", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJEB14803 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29938472 29938472 PRJEB14803_P_NODE_6391_length_536_cov_8.079840_g5947_i0 PRJEB14803 6391 536 8.07984 43.3079424 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 93.6 4.25e-20   NR MCK9273065.1 2044595 g5947 i0 35.3 0.83955223880597 150 90 84 3 22 471 59 201 MCK9273065.1 FkbM family methyltransferase [Candidatus Altimarinota bacterium] diamond 450 93.6 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32056188 32056188 PRJEB14803_P_NODE_438_length_1803_cov_6.310520_g362_i0 PRJEB14803 438 1803 6.31052 113.7786756 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 54.7 0.00139   NR MDP2090848.1 2044595 g362 i0 29.7 0.212978369384359 128 76 19.1 3 1407 1063 493 619 MDP2090848.1 SBBP repeat-containing protein [Candidatus Altimarinota bacterium] diamond 384 54.7 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;