RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB14664" and tax_phylum = "Perkinsozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB14664 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12774784 12774784 PRJEB14664_P_NODE_17091_length_167_cov_1.734848_g16961_i0 PRJEB14664 17091 167 1.734848 2.89719616 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 124 2.9299999999999998e-24   NTclustered gi|294889468|ref|XM_002772782.1| 423536 g16961 i0 80.625 0.958083832335329 160 31 96 0 8 167 443 284 Perkinsus marinus ATCC 50983 translation elongation factor EF-1, subunit alpha,, putative, mRNA blastn 160 124 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
24247062 24247062 PRJEB14664_P_NODE_4000_length_439_cov_1.683168_g3873_i0 PRJEB14664 4000 439 1.683168 7.38910752 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 207 7.51e-65   NR XP_002776364.1 423536 g3873 i0 82.9 3.19817767653759 117 20 80 0 89 439 3 119 XP_002776364.1 adenosylhomocysteinase, putative [Perkinsus marinus ATCC 50983] diamond 1404 207 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
30507054 30507054 PRJEB14664_P_NODE_3933_length_444_cov_1.601467_g3806_i0 PRJEB14664 3933 444 1.601467 7.11051348 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 80.1 8.25e-16   NR XP_002784356.1 423536 g3806 i0 31.8 0.871621621621622 129 88 87.2 0 388 2 19 147 XP_002784356.1 ubiquitin, putative [Perkinsus marinus ATCC 50983] diamond 387 80.1 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;