RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJEB14664", tax_phylum = "Lenarviricota" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Lenarviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJEB14664 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10223867 10223867 PRJEB14664_P_NODE_10049_length_240_cov_8.560976_g9919_i0 PRJEB14664 10049 240 8.560976 20.5463424 Mitovirus sp. 2587224 Viruses Viruses 119 2.1e-22   NTclustered gi|1698234317|gb|MN033515.1| 2587224 g9919 i0 93.671 0.329166666666667 79 5 33 0 23 101 33 111 MAG: Mitovirus sp. isolate H1_Rhizo_26_FD_scaffold_6751 sequence blastn 79 119 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.
16598083 16598083 PRJEB14664_P_NODE_3974_length_441_cov_2.128079_g3847_i0 PRJEB14664 3974 441 2.128079 9.38482839 Chrocagosk virus 3129397 Viruses Viruses 466 1.2899999999999999e-126   NTclustered gi|2717317479|gb|PP171845.1| 3129397 g3847 i0 92.145 71.3446712018141 331 24 75 2 89 419 329 1 MAG: Chrocagosk virus isolate CC1A_k141_83719 genomic sequence blastn 31463 466 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Chrocagosk virus
20421978 20421978 PRJEB14664_P_NODE_7597_length_291_cov_2.234375_g7467_i0 PRJEB14664 7597 291 2.234375 6.50203125 Mitovirus sp. 2587224 Viruses Viruses 174 5.51e-39   NTclustered gi|1698234317|gb|MN033515.1| 2587224 g7467 i0 94.643 3.22680412371134 112 6 38 0 176 287 112 1 MAG: Mitovirus sp. isolate H1_Rhizo_26_FD_scaffold_6751 sequence blastn 939 174 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;