RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJEB14664" and tax_kingdom = "Thermoproteati"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJEB14664 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27096197 27096197 PRJEB14664_P_NODE_12702_length_204_cov_2.573964_g12572_i0 PRJEB14664 12702 204 2.573964 5.25088656 Nitrososphaerota archaeon 2026795 Archaea Archaea 56.2 3.77e-7   NR MDG6996308.1 2026795 g12572 i0 69.4 0.529411764705882 36 11 52.9 0 194 87 422 457 MDG6996308.1 cupredoxin domain-containing protein [Nitrososphaerota archaeon] diamond 108 56.2 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
31518492 31518492 PRJEB14664_P_NODE_1336_length_802_cov_2.092568_g1242_i0 PRJEB14664 1336 802 2.092568 16.78239536 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 48.9 0.00403   NR MBD3187111.1 2026714 g1242 i0 23.3 0.673316708229426 180 110 63.6 6 748 239 8 169 MBD3187111.1 GTP-binding protein [Candidatus Bathyarchaeota archaeon] diamond 540 48.9 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;