RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB14664", tax_kingdom = "Fungi" and tax_phylum = "Olpidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Olpidiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB14664 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17872853 17872853 PRJEB14664_P_NODE_3195_length_504_cov_1.599147_g3073_i0 PRJEB14664 3195 504 1.599147 8.05970088 Fungi 4751 Fungi Fungi 216 9.430000000000001e-66   NR KAG5461456.1 278681 g3073 i0 61.8 27.2857142857143 170 58 99.4 2 503 3 53 218 KAG5461456.1 MAG: P-loop containing nucleoside triphosphate hydrolase protein, partial [Olpidium bornovanus] diamond 13752 218 0.990825688073395 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
29906848 29906848 PRJEB14664_P_NODE_9591_length_249_cov_1.682243_g9461_i0 PRJEB14664 9591 249 1.682243 4.18878507 Olpidium bornovanus 278681 Fungi Fungi 145 2.27e-39   NR KAG5461855.1 278681 g9461 i0 81.7 33.5903614457831 82 15 98.8 0 3 248 93 174 KAG5461855.1 MAG: ClpP/crotonase-like domain-containing protein [Olpidium bornovanus] diamond 8364 145 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;