RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB14664", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB14664 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24247089 24247089 PRJEB14664_P_NODE_5600_length_354_cov_1.880878_g5470_i0 PRJEB14664 5600 354 1.880878 6.65830812 Mitosporidium daphniae 1485682 Fungi Fungi 172 8.209999999999999e-48   NR XP_013238970.1 1485682 g5470 i0 71.2 1 118 32 98.3 1 2 349 274 391 XP_013238970.1 catalase [Mitosporidium daphniae] diamond 354 172 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
25211801 25211801 PRJEB14664_P_NODE_10840_length_228_cov_1.865285_g10710_i0 PRJEB14664 10840 228 1.865285 4.2528498 Mitosporidium daphniae 1485682 Fungi Fungi 120 3.54e-32   NR XP_013238674.1 1485682 g10710 i0 80.6 0.881578947368421 67 13 88.2 0 1 201 111 177 XP_013238674.1 ribosomal protein L15 [Mitosporidium daphniae] diamond 201 120 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;