RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

29 rows where bioproject = "PRJEB14664", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 29 ✖

tax_clade 1

  • Discoba · 29 ✖

bioproject 1

  • PRJEB14664 · 29 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1295394 1295394 PRJEB14664_P_NODE_18942_length_156_cov_1.983471_g18812_i0 PRJEB14664 18942 156 1.983471 3.09421476 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 165 1.58e-36   NTclustered gi|2119449067|ref|XM_044706554.1| 5763 g18812 i0 88.406 0.884615384615385 138 14 88 2 20 156 1 137 Naegleria fowleri uncharacterized protein (FDP41_003269), partial mRNA blastn 138 165 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
2571009 2571009 PRJEB14664_P_NODE_11483_length_220_cov_1.297297_g11353_i0 PRJEB14664 11483 220 1.297297 2.8540534 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 220 5.05e-53   NTclustered gi|290973566|ref|XM_002669473.1| 5762 g11353 i0 88.462 39.2181818181818 182 21 83 0 3 184 182 1 Naegleria gruberi beta-tubulin (NAEGRDRAFT_56391), partial mRNA blastn 8628 220 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
3536369 3536369 PRJEB14664_P_NODE_4863_length_389_cov_1.449153_g4733_i0 PRJEB14664 4863 389 1.449153 5.63720517 Naegleria 5761 Heterolobosea other_Eukaryota 459 1.8699999999999998e-124   NTclustered gi|2651357798|gb|PP174311.1| 37103 g4733 i0 97.398 42.133676092545 269 7 69 0 121 389 3411 3143 Naegleria sp. isolate 33 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 16390 459 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria sp.
5123538 5123538 PRJEB14664_P_NODE_11125_length_225_cov_1.052632_g10995_i0 PRJEB14664 11125 225 1.052632 2.368422 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 327 2.97e-85   NTclustered gi|290984557|ref|XM_002674948.1| 5762 g10995 i0 93.607 4.26666666666667 219 14 97 0 5 223 458 676 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_83230), mRNA blastn 960 327 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
5123713 5123713 PRJEB14664_P_NODE_8345_length_274_cov_1.384937_g8215_i0 PRJEB14664 8345 274 1.384937 3.79472738 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 424 4.63e-114   NTclustered gi|2124407020|ref|XM_044688070.1| 51637 g8215 i0 96.139 87.8394160583942 259 10 95 0 16 274 1 259 Naegleria lovaniensis uncharacterized protein (C9374_012317), partial mRNA blastn 24068 424 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
6399290 6399290 PRJEB14664_P_NODE_13106_length_200_cov_2.090909_g12976_i0 PRJEB14664 13106 200 2.090909 4.181818 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 189 1.2699999999999999e-43   NTclustered gi|290999450|ref|XM_002682247.1| 5762 g12976 i0 86.628 3.725 172 22 86 1 28 199 9 179 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_35035), partial mRNA blastn 745 189 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
7673358 7673358 PRJEB14664_P_NODE_12627_length_205_cov_1.782353_g12497_i0 PRJEB14664 12627 205 1.782353 3.65382365 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 296 7.49e-76   NTclustered gi|2119443543|ref|XM_044695866.1| 51637 g12497 i0 94.764 3.96585365853659 191 8 93 2 1 190 190 1 Naegleria lovaniensis uncharacterized protein (C9374_006048), partial mRNA blastn 813 296 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
7673384 7673384 PRJEB14664_P_NODE_14567_length_187_cov_1.059211_g14437_i0 PRJEB14664 14567 187 1.059211 1.98072457 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 274 3.14e-69   NTclustered gi|290994379|ref|XM_002679764.1| 5762 g14437 i0 93.048 2.18181818181818 187 13 100 0 1 187 335 149 Naegleria gruberi 60S ribosomal protein L9 (NAEGRDRAFT_38410), mRNA blastn 408 274 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
7673453 7673453 PRJEB14664_P_NODE_2787_length_544_cov_2.298625_g2669_i0 PRJEB14664 2787 544 2.298625 12.50452 Acrasis kona 1008807 Heterolobosea other_Eukaryota 162 2.9199999999999995e-43   NR KAL0487961.1 1008807 g2669 i0 45.7 2.86213235294118 175 92 96.5 1 530 6 4 175 KAL0487961.1 acyl-CoA oxidase [Acrasis kona] diamond 1557 162 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
11499228 11499228 PRJEB14664_P_NODE_17590_length_164_cov_1.240310_g17460_i0 PRJEB14664 17590 164 1.24031 2.0341084 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 254 3.5e-63   NTclustered gi|290991471|ref|XM_002678313.1| 5762 g17460 i0 94.512 2 164 9 100 0 1 164 510 347 Naegleria gruberi 60S ribosomal protein L38 (NAEGRDRAFT_66493), partial mRNA blastn 328 254 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
12464932 12464932 PRJEB14664_P_NODE_9870_length_244_cov_1.722488_g9740_i0 PRJEB14664 9870 244 1.722488 4.20287072 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 316 7.069999999999998e-82   NTclustered gi|829212|emb|X81050.1| 5762 g9740 i0 90.123 97.6475409836066 243 24 99 0 2 244 512 270 N.gruberi mRNA for beta-tubulin blastn 23826 316 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
12774825 12774825 PRJEB14664_P_NODE_3391_length_486_cov_2.274945_g3267_i0 PRJEB14664 3391 486 2.274945 11.0562327 root 1 Root_unresolved Root_unresolved 207 2.24e-65   NR XP_044561309.1 5763 g3267 i0 75 11.7345679012346 128 32 79 0 485 102 3 130 XP_044561309.1 uncharacterized protein FDP41_004495 [Naegleria fowleri] diamond 5703 208 0.995192307692308 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
15013634 15013634 PRJEB14664_P_NODE_9772_length_246_cov_1.137441_g9642_i0 PRJEB14664 9772 246 1.137441 2.79810486 Naegleria 5761 Heterolobosea other_Eukaryota 388 1.49e-103   NTclustered gi|2618963742|gb|OR769034.1| 5762 g9642 i0 95.122 10.4105691056911 246 12 100 0 1 246 5532 5777 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 2561 388 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
15323319 15323319 PRJEB14664_P_NODE_12233_length_210_cov_1.371429_g12103_i0 PRJEB14664 12233 210 1.371429 2.8800009 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 300 5.96e-77   NTclustered gi|2119425459|ref|XM_044697993.1| 51637 g12103 i0 92.381 4 210 16 100 0 1 210 450 241 Naegleria lovaniensis uncharacterized protein (C9374_000797), partial mRNA blastn 840 300 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
19146696 19146696 PRJEB14664_P_NODE_16436_length_172_cov_1.167883_g16306_i0 PRJEB14664 16436 172 1.167883 2.00875876 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 121 3.9e-23   NTclustered gi|2124392890|ref|XM_044712220.1| 5763 g16306 i0 81.944 4.94186046511628 144 24 83 2 30 172 312 170 Naegleria fowleri uncharacterized protein (FDP41_008374), partial mRNA blastn 850 121 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
21698017 21698017 PRJEB14664_P_NODE_9738_length_246_cov_1.895735_g9608_i0 PRJEB14664 9738 246 1.895735 4.6635081 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 257 4.39e-64   NTclustered gi|290983033|ref|XM_002674188.1| 5762 g9608 i0 85.657 3.29268292682927 251 29 100 3 1 246 450 202 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_80683), mRNA blastn 810 257 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
23938129 23938129 PRJEB14664_P_NODE_7259_length_300_cov_2.403774_g7129_i0 PRJEB14664 7259 300 2.403774 7.211322 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 494 3.86e-135   NTclustered gi|2618963742|gb|OR769034.1| 5762 g7129 i0 96.333 26.8066666666667 300 11 100 0 1 300 2701 2402 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 8042 494 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
24246962 24246962 PRJEB14664_P_NODE_12480_length_207_cov_1.534884_g12350_i0 PRJEB14664 12480 207 1.534884 3.17720988 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 272 1.28e-68   NTclustered gi|290985037|ref|XM_002675187.1| 5762 g12350 i0 90.338 3.92753623188406 207 20 100 0 1 207 385 179 Naegleria gruberi 40S ribosomal protein S13 (NAEGRDRAFT_58574), mRNA blastn 813 272 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
26937979 26937979 PRJEB14664_P_NODE_17102_length_167_cov_1.515152_g16972_i0 PRJEB14664 17102 167 1.515152 2.53030384 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 110 6.200000000000001e-28   NR XP_002680196.1 5762 g16972 i0 92.7 0.988023952095808 55 4 98.8 0 166 2 18 72 XP_002680196.1 60S ribosomal protein L2 [Naegleria gruberi] diamond 165 110 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
27633446 27633446 PRJEB14664_P_NODE_2084_length_636_cov_5.690516_g1975_i0 PRJEB14664 2084 636 5.690516 36.19168176 Acrasis kona 1008807 Heterolobosea other_Eukaryota 48.9 0.00322   NR KAL0481817.1 1008807 g1975 i0 26.2 0.665094339622642 141 74 53.3 4 271 609 53 191 KAL0481817.1 hypothetical protein AKO1_012399 [Acrasis kona] diamond 423 48.9 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
28138776 28138776 PRJEB14664_P_NODE_14225_length_190_cov_1.290323_g14095_i0 PRJEB14664 14225 190 1.290323 2.4516137 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 48.1 1.41e-4   NR XP_002678222.1 5762 g14095 i0 48.9 1.32631578947368 45 23 71.1 0 189 55 114 158 XP_002678222.1 ras family small GTPase [Naegleria gruberi] diamond 252 48.1 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
28549201 28549201 PRJEB14664_P_NODE_13867_length_193_cov_1.012658_g13737_i0 PRJEB14664 13867 193 1.012658 1.95442994 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 52.8 5.36e-6   NR XP_002682034.1 5762 g13737 i0 57.4 0.948186528497409 61 22 94.8 1 6 188 6 62 XP_002682034.1 uncharacterized protein NAEGRDRAFT_78127 [Naegleria gruberi] diamond 183 52.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29149286 29149286 PRJEB14664_P_NODE_18049_length_161_cov_1.269841_g17919_i0 PRJEB14664 18049 161 1.269841 2.04444401 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 52.4 4.86e-6   NR XP_002669434.1 5762 g17919 i0 64.3 0.782608695652174 42 14 78.3 1 129 4 952 992 XP_002669434.1 uncharacterized protein NAEGRDRAFT_82167 [Naegleria gruberi] diamond 126 52.4 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30286247 30286247 PRJEB14664_P_NODE_1672_length_715_cov_2.583824_g1571_i0 PRJEB14664 1672 715 2.583824 18.4743416 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 64.7 5.37e-8   NR CAG4717172.1 5763 g1571 i0 28.8 1.61118881118881 205 135 84.3 5 643 41 195 392 CAG4717172.1 unnamed protein product [Naegleria fowleri] diamond 1152 64.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
31138576 31138576 PRJEB14664_P_NODE_11775_length_216_cov_1.104972_g11645_i0 PRJEB14664 11775 216 1.104972 2.38673952 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 86.3 9.04e-19   NR XP_002676748.1 5762 g11645 i0 82 0.847222222222222 61 11 84.7 0 3 185 156 216 XP_002676748.1 uncharacterized protein NAEGRDRAFT_68050 [Naegleria gruberi] diamond 183 86.3 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
31575434 31575434 PRJEB14664_P_NODE_3656_length_465_cov_1.683721_g3531_i0 PRJEB14664 3656 465 1.683721 7.82930265 Naegleria 5761 Heterolobosea other_Eukaryota 85.1 4.3e-16   NR XP_044564671.1 5763 g3531 i0 52.9 1.64516129032258 68 31 43.9 1 445 242 171 237 XP_044564671.1 uncharacterized protein FDP41_001111 [Naegleria fowleri] diamond 765 85.5 0.9953216374269 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
31771404 31771404 PRJEB14664_P_NODE_9457_length_251_cov_2.754630_g9327_i0 PRJEB14664 9457 251 2.75463 6.9141213 Acrasis kona 1008807 Heterolobosea other_Eukaryota 62.8 2.33e-10   NR KAL0490923.1 1008807 g9327 i0 46.5 0.848605577689243 71 27 84.9 1 36 248 13 72 KAL0490923.1 ribosomal protein S20 [Acrasis kona] diamond 213 62.8 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
32081360 32081360 PRJEB14664_P_NODE_7358_length_298_cov_1.505703_g7228_i0 PRJEB14664 7358 298 1.505703 4.48699494 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 183 4.589999999999999e-55   NR XP_044557880.1 5763 g7228 i0 85.9 4.98322147651007 99 14 99.7 0 2 298 53 151 XP_044557880.1 uncharacterized protein FDP41_008374 [Naegleria fowleri] diamond 1485 184 0.994565217391304 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
32151134 32151134 PRJEB14664_P_NODE_14938_length_183_cov_1.891892_g14808_i0 PRJEB14664 14938 183 1.891892 3.46216236 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 99 1.09e-24   NR XP_044552838.1 51637 g14808 i0 89.5 0.934426229508197 57 6 93.4 0 3 173 88 144 XP_044552838.1 uncharacterized protein C9374_000285 [Naegleria lovaniensis] diamond 171 99 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;