RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB14664" and tax_clade = "Candidatus Thermofonsia Clade 3"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Candidatus Thermofonsia Clade 3 · 2 ✖

bioproject 1

  • PRJEB14664 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14049396 14049396 PRJEB14664_P_NODE_4212_length_426_cov_2.414322_g4085_i0 PRJEB14664 4212 426 2.414322 10.28501172 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 414 4.5499999999999996e-111   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g4085 i0 84.615 168.143192488263 429 52 98 13 8 426 3495852 3496276 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 71629 414 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
15323352 15323352 PRJEB14664_P_NODE_15673_length_177_cov_2.253521_g15543_i0 PRJEB14664 15673 177 2.253521 3.98873217 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 172 1.0999999999999999e-38   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g15543 i0 84.483 184.293785310734 174 27 98 0 4 177 3497901 3497728 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 32620 172 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;