RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJEB14664", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 7 ✖

tax_clade 1

  • Apusozoa · 7 ✖

bioproject 1

  • PRJEB14664 · 7 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3847496 3847496 PRJEB14664_P_NODE_684_length_1089_cov_3.419355_g623_i0 PRJEB14664 684 1089 3.419355 37.23677595 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 401 4.87e-136   NR XP_013760592.1 461836 g623 i0 67.9 0.823691460055096 299 92 81.8 2 58 948 43 339 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 897 401 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
14049415 14049415 PRJEB14664_P_NODE_5932_length_341_cov_1.490196_g5802_i0 PRJEB14664 5932 341 1.490196 5.08156836 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 145 1.06e-39   NR XP_013760592.1 461836 g5802 i0 74.3 0.92375366568915 105 24 90.6 2 12 320 34 137 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 315 145 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
19146650 19146650 PRJEB14664_P_NODE_11156_length_224_cov_1.962963_g11026_i0 PRJEB14664 11156 224 1.962963 4.39703712 Catacumbia lutetiensis 2925415 Root_unresolved Root_unresolved 159 1.14e-34   NTclustered gi|2206682166|gb|OM966639.1| 2925415 g11026 i0 89.6 53.3214285714286 125 13 56 0 64 188 5178 5302 Catacumbia lutetiensis strain ORSAYFEB19APU2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11944 159 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Catacumbia Catacumbia lutetiensis
27822965 27822965 PRJEB14664_P_NODE_6924_length_309_cov_1.894161_g6794_i0 PRJEB14664 6924 309 1.894161 5.85295749 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 128 2.31e-32   NR XP_013757640.1 461836 g6794 i0 64.7 6.97087378640777 102 34 97.1 1 302 3 125 226 XP_013757640.1 Cdc20 [Thecamonas trahens ATCC 50062] diamond 2154 128 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29716956 29716956 PRJEB14664_P_NODE_4610_length_403_cov_2.138587_g4481_i0 PRJEB14664 4610 403 2.138587 8.61850561 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 50.4 4.34e-4   NR XP_013753749.1 461836 g4481 i0 48 0.372208436724566 50 22 35 2 276 136 215 263 XP_013753749.1 uncharacterized protein AMSG_10263 [Thecamonas trahens ATCC 50062] diamond 150 50.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32246336 32246336 PRJEB14664_P_NODE_12318_length_209_cov_1.379310_g12188_i0 PRJEB14664 12318 209 1.37931 2.8827579 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 42.7 0.0246   NR XP_013757418.1 461836 g12188 i0 48.6 0.5311004784689 37 19 53.1 0 208 98 668 704 XP_013757418.1 uncharacterized protein AMSG_06249 [Thecamonas trahens ATCC 50062] diamond 111 42.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32562672 32562672 PRJEB14664_P_NODE_11119_length_225_cov_1.236842_g10989_i0 PRJEB14664 11119 225 1.236842 2.7828945 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 48.9 1.85e-4   NR XP_013759479.1 461836 g10989 i0 58.1 0.573333333333333 43 16 54.7 1 207 85 1 43 XP_013759479.1 uncharacterized protein AMSG_02572 [Thecamonas trahens ATCC 50062] diamond 129 48.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;