RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJEB14175" and tax_phylum = "Thermoplasmatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJEB14175 · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25511987 25511987 PRJEB14175_P_NODE_85993_length_391_cov_22.230303_g83728_i0 PRJEB14175 85993 391 22.230303 86.92048473 Candidatus Methanomassiliicoccus intestinalis 1406512 Archaea Archaea 379 1.51e-100   NTclustered gi|1721134172|emb|LR698974.1| 1406512 g83728 i0 85.255 52.7493606138107 373 50 94 4 23 391 1456584 1456213 Candidatus Methanomassiliicoccus intestinalis isolate MGYG-HGUT-02160 genome assembly, chromosome: 1 blastn 20625 379 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae Methanomassiliicoccus Candidatus Methanomassiliicoccus intestinalis
33007765 33007765 PRJEB14175_P_NODE_101355_length_355_cov_1.173469_g99089_i0 PRJEB14175 101355 355 1.173469 4.16581495 root 1 Root_unresolved Root_unresolved 57.8 7.05e-7   NR MEE9116493.1 1906666 g99089 i0 38.4 2.54366197183099 73 38 55.8 1 10 207 302 374 MEE9116493.1 PQQ-binding-like beta-propeller repeat protein [Thermoplasmata archaeon] diamond 903 58.2 0.993127147766323 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
33113665 33113665 PRJEB14175_P_NODE_170207_length_254_cov_3.865285_g167940_i0 PRJEB14175 170207 254 3.865285 9.8178239 Acidiplasma aeolicum 507754 Archaea Archaea 41.2 0.0471   NR KPV46710.1 507754 g167940 i0 38.1 0.74409448818897606 63 31 74.4 2 44 232 38 92 KPV46710.1 hypothetical protein SE19_04350 [Acidiplasma aeolicum] diamond 189 41.2 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales Ferroplasmaceae Acidiplasma Acidiplasma aeolicum
33114741 33114741 PRJEB14175_P_NODE_49167_length_532_cov_4.405520_g46938_i0 PRJEB14175 49167 532 4.40552 23.4373664 Candidatus Thalassarchaeaceae archaeon 2670411 Archaea Archaea 49.7 0.00217   NR HJL59397.1 2670411 g46938 i0 33.3 1.21804511278195 108 55 57 3 11 313 105 202 HJL59397.1 S8 family serine peptidase [Candidatus Thalassarchaeaceae archaeon] diamond 648 49.7 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Thalassarchaeaceae   Candidatus Thalassarchaeaceae archaeon
33131304 33131304 PRJEB14175_P_NODE_223303_length_211_cov_2.853333_g221035_i0 PRJEB14175 223303 211 2.853333 6.02053263 Thermoplasmatota archaeon 2806419 Archaea Archaea 85.5 1.01e-18   NR MCL5678599.1 2806419 g221035 i0 67.2 3.49763033175355 61 20 86.7 0 191 9 68 128 MCL5678599.1 IS607 family transposase [Thermoplasmatota archaeon] diamond 738 85.5 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
33131686 33131686 PRJEB14175_P_NODE_270383_length_189_cov_8.281250_g268115_i0 PRJEB14175 270383 189 8.28125 15.6515625 Thermoplasmatales archaeon 2268204 Archaea Archaea 67.8 2.73e-11   NR MEM0135853.1 2268204 g268115 i0 59.3 1.71428571428571 54 21 85.7 1 1 162 545 597 MEM0135853.1 RNase H-like domain-containing protein [Thermoplasmatales archaeon] diamond 324 67.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;