RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB14175" and tax_phylum = "Fidelibacterota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB14175 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26326218 26326218 PRJEB14175_P_NODE_49807_length_528_cov_15.668094_g47574_i0 PRJEB14175 49807 528 15.668094 82.72753632 Fidelibacter multiformis 3377529 Bacteria Bacteria 274 1.02e-68   NTclustered gi|2752026413|dbj|AP035449.1| 3377529 g47574 i0 76.967 147.295454545455 521 95 96 21 24 528 805686 806197 Candidatus Neomarinimicrobiota bacterium IA91 DNA, complete genome blastn 77772 274 1 Bacteria FCB group Pseudomonadati Fidelibacterota Fidelibacteria Fidelibacterales Fidelibacteraceae Fidelibacter Fidelibacter multiformis
32909161 32909161 PRJEB14175_P_NODE_213409_length_218_cov_2.165605_g211142_i0 PRJEB14175 213409 218 2.165605 4.7210189 Fidelibacterota bacterium 2026760 Bacteria Bacteria 45.4 3.71e-4   NR MCH7496149.1 2026760 g211142 i0 39.4 0.977064220183486 71 40 95 2 3 209 8 77 MCH7496149.1 hypothetical protein [Fidelibacterota bacterium] diamond 213 45.4 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32944450 32944450 PRJEB14175_P_NODE_83314_length_399_cov_1.609467_g81050_i0 PRJEB14175 83314 399 1.609467 6.42177333 Fidelibacterota bacterium 2026760 Bacteria Bacteria 131 1.24e-34   NR HDN58359.1 2026760 g81050 i0 48.8 0.954887218045113 127 65 95.5 0 385 5 8 134 HDN58359.1 formamidase [Fidelibacterota bacterium] diamond 381 131 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32960241 32960241 PRJEB14175_P_NODE_164578_length_260_cov_2.572864_g162311_i0 PRJEB14175 164578 260 2.572864 6.6894464 Fidelibacterota bacterium 2026760 Bacteria Bacteria 57.4 2.74e-7   NR MBT4129934.1 2026760 g162311 i0 53.5 1.15384615384615 43 20 49.6 0 150 22 58 100 MBT4129934.1 RNase H superfamily protein [Fidelibacterota bacterium] diamond 300 57.4 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;