RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB14175", tax_phylum = "Candidatus Desantisiibacteriota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 1 ✖

tax_phylum 1

  • Candidatus Desantisiibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJEB14175 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26056371 26056371 PRJEB14175_P_NODE_88693_length_384_cov_26.684211_g86428_i0 PRJEB14175 88693 384 26.684211 102.46737024 Bacteria 2 Bacteria Bacteria 115 1.64e-28   NR PIV56617.1 1974548 g86428 i0 65.3 1.171875 75 25 58.6 1 24 248 199 272 PIV56617.1 MAG: hypothetical protein COS16_03400 [Candidatus Desantisbacteria bacterium CG02_land_8_20_14_3_00_49_13] diamond 450 115 1 Bacteria Bacteria candidate phyla   Candidatus Desantisiibacteriota         Candidatus Desantisbacteria bacterium CG02_land_8_20_14_3_00_49_13

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;