RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB14175" and tax_phylum = "Candidatus Bipolaricaulota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Bipolaricaulota · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB14175 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
33011583 33011583 PRJEB14175_P_NODE_192980_length_234_cov_1.109827_g190713_i0 PRJEB14175 192980 234 1.109827 2.59699518 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 64.3 7.52e-10   NR MBC7221926.1 2306012 g190713 i0 54.5 3.33333333333333 55 24 70.5 1 65 229 7 60 MBC7221926.1 BMP family ABC transporter substrate-binding protein [Candidatus Bipolaricaulota bacterium] diamond 780 64.3 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium
33059362 33059362 PRJEB14175_P_NODE_91789_length_377_cov_2.417722_g89523_i0 PRJEB14175 91789 377 2.417722 9.11481194 Thermotogati 3384194 Bacteria Bacteria 100 5.2699999999999997e-23   NR BAL58421.1 1446466 g89523 i0 73.1 2.22811671087533 67 18 53.3 0 332 132 39 105 BAL58421.1 permease, DMT superfamily [Candidatus Acetithermum autotrophicum] diamond 840 101 0.99009900990099 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota       Candidatus Acetithermum Candidatus Acetithermum autotrophicum
33127232 33127232 PRJEB14175_P_NODE_129855_length_304_cov_3.000000_g127588_i0 PRJEB14175 129855 304 3 9.12 Bacteria candidate phyla 1783234 Bacteria Bacteria 115 2.7000000000000003e-28   NR BAL57378.1 236499 g127588 i0 70.1 3.96710526315789 67 20 66.1 0 93 293 188 254 BAL57378.1 selenate reductase [uncultured Acetothermia bacterium] diamond 1206 115 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         uncultured Acetothermia bacterium
33165620 33165620 PRJEB14175_P_NODE_260152_length_201_cov_0.914286_g257884_i0 PRJEB14175 260152 201 0.914286 1.83771486 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 53.5 1.92e-6   NR MCK4394645.1 2306012 g257884 i0 45.3 0.791044776119403 53 28 77.6 1 3 158 143 195 MCK4394645.1 FxLYD domain-containing protein [Candidatus Bipolaricaulota bacterium] diamond 159 53.5 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;