RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB14175", tax_kingdom = "Pararnavirae" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 4 ✖

bioproject 1

  • PRJEB14175 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25608650 25608650 PRJEB14175_P_NODE_1913_length_2377_cov_621.191710_g490_i1 PRJEB14175 1913 2377 621.19171 14765.7269467 root 1 Root_unresolved Root_unresolved 2130 0   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g490 i1 99.827 91.5944467816576 1159 2 91 0 1116 2274 3754 2596 Moloney murine leukemia virus, complete genome blastn 217720 2130 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
25610715 25610715 PRJEB14175_P_NODE_4969_length_1535_cov_637.118725_g490_i4 PRJEB14175 4969 1535 637.118725 9779.77242875 Gammaretrovirus 153135 Viruses Viruses 2470 0   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g490 i4 100 87.8899022801303 1337 0 89 0 96 1432 3932 2596 Moloney murine leukemia virus, complete genome blastn 134911 2470 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
26561606 26561606 PRJEB14175_P_NODE_2240_length_2212_cov_577.461181_g490_i2 PRJEB14175 2240 2212 577.461181 12773.44132372 Gammaretrovirus 153135 Viruses Viruses 3692 0   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g490 i2 99.9 89.8444846292948 2005 2 91 0 105 2109 4600 2596 Moloney murine leukemia virus, complete genome blastn 198736 3692 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
32961692 32961692 PRJEB14175_P_NODE_81522_length_404_cov_1.860058_g79260_i0 PRJEB14175 81522 404 1.860058 7.51463432 Figwort mosaic virus 10649 Viruses Viruses 117 1.27e-30   NR NP_619545.1 10649 g79260 i0 62.9 0.660891089108911 89 33 66.1 0 275 9 5 93 NP_619545.1 unnamed protein product [Figwort mosaic virus] diamond 267 117 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Caulimovirus Caulimovirus tesselloscrophulariae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;