RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB14175", tax_clade = "RNA satellites" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_clade 1

  • RNA satellites · 2 ✖

bioproject 1

  • PRJEB14175 · 2 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32908151 32908151 PRJEB14175_P_NODE_103129_length_351_cov_2.634483_g100863_i0 PRJEB14175 103129 351 2.634483 9.24703533 Blackcurrant reversion virus satellite RNA 99930 Viruses Viruses 48.9 7.98e-4   NR NP_624321.1 99930 g100863 i0 34.4 0.82051282051282 96 60 81.2 3 338 54 141 234 NP_624321.1 hypothetical protein [Blackcurrant reversion virus satellite RNA] diamond 288 48.9 1 Viruses RNA satellites             Blackcurrant reversion virus satellite RNA
33062258 33062258 PRJEB14175_P_NODE_141493_length_287_cov_8.283186_g139226_i0 PRJEB14175 141493 287 8.283186 23.77274382 Blackcurrant reversion virus satellite RNA 99930 Viruses Viruses 48.1 7.58e-4   NR NP_624321.1 99930 g139226 i0 66.7 0.313588850174216 30 10 31.4 0 276 187 373 402 NP_624321.1 hypothetical protein [Blackcurrant reversion virus satellite RNA] diamond 90 48.1 1 Viruses RNA satellites             Blackcurrant reversion virus satellite RNA

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;