RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJEB14175", tax_clade = "FCB group" and tax_phylum = "Candidatus Latescibacterota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 6 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 6 ✖

bioproject 1

  • PRJEB14175 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25919470 25919470 PRJEB14175_P_NODE_72268_length_433_cov_1.529570_g70009_i0 PRJEB14175 72268 433 1.52957 6.6230381 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 122 5.790000000000001e-29   NR MBD3161697.1 2053570 g70009 i0 68.5 1.20554272517321 89 26 60.3 1 422 162 181 269 MBD3161697.1 malto-oligosyltrehalose synthase [Candidatus Latescibacterota bacterium] diamond 522 122 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
26048817 26048817 PRJEB14175_P_NODE_177381_length_247_cov_3.430108_g175114_i0 PRJEB14175 177381 247 3.430108 8.47236676 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 145 3.58e-30   NTclustered gi|2891482399|emb|OZ220089.1| 2053570 g175114 i0 83.537 20.4089068825911 164 17 63 8 1 156 2870191 2870030 MAG: Candidatus Latescibacterota bacterium isolate 4e2a754f-172e-45f6-b93c-83e01e84db49 genome assembly, chromosome: 1 blastn 5041 145 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
26055575 26055575 PRJEB14175_P_NODE_74197_length_426_cov_10.772603_g71938_i0 PRJEB14175 74197 426 10.772603 45.891288779999996 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 132 5.13e-26   NTclustered gi|2893358441|emb|OZ220733.1| 2053570 g71938 i0 74.221 70.0234741784038 353 74 80 17 56 396 4162976 4163323 MAG: Candidatus Latescibacterota bacterium isolate cc6a1995-d657-4e87-88a0-a2308bb9e8e7 genome assembly, chromosome: 1 blastn 29830 132 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
32960824 32960824 PRJEB14175_P_NODE_229578_length_209_cov_0.864865_g227310_i0 PRJEB14175 229578 209 0.864865 1.80756785 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 100 1.11e-25   NR MCC7264640.1 2053570 g227310 i0 70.1 0.961722488038278 67 20 96.2 0 209 9 7 73 MCC7264640.1 DUF1330 domain-containing protein [Candidatus Latescibacterota bacterium] diamond 201 100 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
33062440 33062440 PRJEB14175_P_NODE_160229_length_265_cov_1.137255_g157962_i0 PRJEB14175 160229 265 1.137255 3.01372575 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 45.1 0.00746   NR MBI2504058.1 2053570 g157962 i0 60 0.339622641509434 30 12 34 0 126 37 85 114 MBI2504058.1 TolC family protein [Candidatus Latescibacterota bacterium] diamond 90 45.1 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
33097843 33097843 PRJEB14175_P_NODE_59806_length_480_cov_5.116945_g57553_i0 PRJEB14175 59806 480 5.116945 24.561336 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 110 6.68e-27   NR MDP6777050.1 2053570 g57553 i0 45 0.875 140 69 85 4 19 426 64 199 MDP6777050.1 hypothetical protein [Candidatus Latescibacterota bacterium] diamond 420 110 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;