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contig_metadata

11 rows where bioproject = "PRJEB14175", tax_clade = "Amoebozoa" and tax_phylum = "Tubulinea"

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tax_superkingdom 1

tax_phylum 1

  • Tubulinea · 11 ✖

tax_clade 1

  • Amoebozoa · 11 ✖

bioproject 1

  • PRJEB14175 · 11 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25511846 25511846 PRJEB14175_P_NODE_83385_length_398_cov_30.510386_g81121_i0 PRJEB14175 83385 398 30.510386 121.43133628 Paraflabellula hoguae 136459 Tubulinea other_Eukaryota 449 1.1599999999999999e-121   NTclustered gi|145386791|gb|EF216916.1| 136459 g81121 i0 89.802 94.7110552763819 353 33 88 3 48 398 1 352 Paraflabellula hoguae 28S large subunit ribosomal RNA gene, partial sequence blastn 37695 449 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae Paraflabellula Paraflabellula hoguae
25641043 25641043 PRJEB14175_P_NODE_190018_length_236_cov_2.794286_g187751_i0 PRJEB14175 190018 236 2.794286 6.59451496 Heleopera rosea 499111 Tubulinea other_Eukaryota 156 1.57e-33   NTclustered gi|166203599|gb|EU392157.1| 499111 g187751 i0 80.905 73.0974576271186 199 36 83 2 40 236 428 626 Heleopera rosea from Switzerland small subunit ribosomal RNA gene, partial sequence blastn 17251 156 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Heleoperidae Heleopera Heleopera rosea
25644645 25644645 PRJEB14175_P_NODE_279378_length_170_cov_4.009174_g277110_i0 PRJEB14175 279378 170 4.009174 6.8155958 Leptomyxa silvatica 2865940 Tubulinea other_Eukaryota 302 1.28e-77   NTclustered gi|2075694065|gb|MZ687121.1| 2865940 g277110 i0 98.824 99.0117647058824 170 1 100 1 1 170 5 173 Leptomyxa silvatica strain Tomsk small subunit ribosomal RNA gene, partial sequence blastn 16832 302 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Leptomyxidae Leptomyxa Leptomyxa silvatica
25773838 25773838 PRJEB14175_P_NODE_117971_length_323_cov_3.664122_g115705_i0 PRJEB14175 117971 323 3.664122 11.83511406 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 403 7.27e-108   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g115705 i0 90.728 46.3157894736842 302 28 93 0 22 323 2313 2614 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 14960 403 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
25779731 25779731 PRJEB14175_P_NODE_250179_length_203_cov_1.373239_g247911_i0 PRJEB14175 250179 203 1.373239 2.78767517 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 364 2e-96   NTclustered gi|300078496|gb|GU001158.1| 5778 g247911 i0 99.015 95.807881773399 203 2 100 0 1 203 2235 2033 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 19449 364 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
26015251 26015251 PRJEB14175_P_NODE_100116_length_357_cov_9.192568_g97850_i0 PRJEB14175 100116 357 9.192568 32.81746776 Hartmannellidae 5776 Tubulinea other_Eukaryota 597 3.4599999999999986e-166   NTclustered gi|11527309|gb|AF293902.1|AF293902 136464 g97850 i0 98.806 92.0028011204482 335 4 94 0 1 335 1210 876 Saccamoeba limax small subunit ribosomal RNA gene, complete sequence blastn 32845 603 0.990049751243781 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Saccamoeba Saccamoeba limax
26018829 26018829 PRJEB14175_P_NODE_38324_length_602_cov_49.602588_g36147_i0 PRJEB14175 38324 602 49.602588 298.60757976 Vermamoeba 1260114 Tubulinea other_Eukaryota 963 0   NTclustered gi|909719645|gb|KT185625.1| 5778 g36147 i0 98.185 52.6644518272425 551 10 92 0 52 602 5244 5794 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 31704 963 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
26049370 26049370 PRJEB14175_P_NODE_189669_length_236_cov_7.931429_g187402_i0 PRJEB14175 189669 236 7.931429 18.71817244 Paraflabellula hoguae 136459 Tubulinea other_Eukaryota 259 1.16e-64   NTclustered gi|145386791|gb|EF216916.1| 136459 g187402 i0 88.785 89.5254237288136 214 21 89 2 4 214 1511 1298 Paraflabellula hoguae 28S large subunit ribosomal RNA gene, partial sequence blastn 21128 259 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae Paraflabellula Paraflabellula hoguae
26153604 26153604 PRJEB14175_P_NODE_220133_length_213_cov_4.631579_g217865_i0 PRJEB14175 220133 213 4.631579 9.86526327 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 375 9.79e-100   NTclustered gi|300078496|gb|GU001158.1| 5778 g217865 i0 100 6.89201877934272 203 0 95 0 11 213 997 1199 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1468 375 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
26323205 26323205 PRJEB14175_P_NODE_234095_length_207_cov_1.945205_g231827_i0 PRJEB14175 234095 207 1.945205 4.02657435 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 117 6.33e-22   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g231827 i0 84.298 31.56038647343 121 18 58 1 17 137 3703 3822 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 6533 117 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
26324729 26324729 PRJEB14175_P_NODE_273071_length_185_cov_5.516129_g270803_i0 PRJEB14175 273071 185 5.516129 10.20483865 Ptolemeba bulliensis 1525729 Tubulinea other_Eukaryota 285 1.43e-72   NTclustered gi|2723225182|gb|PP732398.1| 1525729 g270803 i0 98.171 79.2864864864865 164 2 88 1 23 185 444 607 Ptolemeba bulliensis isolate P4F0 EUK small subunit ribosomal RNA gene, partial sequence blastn 14668 285 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Ptolemeba Ptolemeba bulliensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;