RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB1404" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJEB1404 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1295283 1295283 PRJEB1404_S_NODE_1162_length_267_cov_60.125000_g1142_i0 PRJEB1404 1162 267 60.125 160.53375 Orthoebolavirus sudanense 3052460 Viruses Viruses 63.9 1.13e-5   NTclustered gi|2471616984|gb|OQ673055.1| 186540 g1142 i0 97.297 12.6404494382022 37 1 14 0 231 267 37 1 Sudan ebolavirus isolate Ebolavirus/H.sapiens-wt/Uganda/2022/2022002394_C054, partial genome blastn 3375 63.9 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Filoviridae Orthoebolavirus Orthoebolavirus sudanense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;