RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB1404", tax_kingdom = "Heunggongvirae" and tax_phylum = "Peploviricota"

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tax_superkingdom 1

tax_phylum 1

  • Peploviricota · 3 ✖

tax_kingdom 1

  • Heunggongvirae · 3 ✖

bioproject 1

  • PRJEB1404 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2260998 2260998 PRJEB1404_S_NODE_2062_length_222_cov_36.235294_g2042_i0 PRJEB1404 2062 222 36.235294 80.44235268 Heunggongvirae 2731360 Viruses Viruses 52.8 0.02   NTclustered gi|2609791678|gb|OR652420.1| 10376 g2042 i0 100 0.252252252252252 28 0 13 0 190 217 33778 33751 Human gammaherpesvirus 4 strain 719, partial genome blastn 56 52.8 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
9913883 9913883 PRJEB1404_S_NODE_2828_length_191_cov_52.660256_g2808_i0 PRJEB1404 2828 191 52.660256 100.58108896 Heunggongvirae 2731360 Viruses Viruses 52.8 0.016   NTclustered gi|2609791678|gb|OR652420.1| 10376 g2808 i0 100 0.293193717277487 28 0 15 0 6 33 33751 33778 Human gammaherpesvirus 4 strain 719, partial genome blastn 56 52.8 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
21387840 21387840 PRJEB1404_S_NODE_2257_length_212_cov_157.033898_g2237_i0 PRJEB1404 2257 212 157.033898 332.91186376 root 1 Root_unresolved Root_unresolved 63.9 8.61e-6   NTclustered gi|1893169343|gb|MT364888.1| 10310 g2237 i0 97.297 17.2311320754717 37 1 17 0 1 37 47 83 Human alphaherpesvirus 2, partial genome blastn 3653 63.9 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Simplexvirus Simplexvirus humanalpha2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;