contig_metadata
12 rows where bioproject = "PRJEB12982" and tax_phylum = "Pisuviricota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1295220 | 1295220 | PRJEB12982_P_NODE_3582_length_405_cov_1.522472_g3419_i0 | PRJEB12982 | 3582 | 405 | 1.522472 | 6.1660116 | Zebrafish picornavirus 1 | 2304617 | Viruses | Viruses | 625 | 1.8299999999999995e-174 | NTclustered | gi|2500378199|ref|NC_076245.1| | 2304617 | g3419 | i0 | 94.554 | 2.99259259259259 | 404 | 22 | 99 | 0 | 1 | 404 | 5149 | 5552 | Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome | blastn | 1212 | 625 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Zebrafish picornavirus 1 | |||
| 5123264 | 5123264 | PRJEB12982_P_NODE_13185_length_193_cov_1.055556_g13022_i0 | PRJEB12982 | 13185 | 193 | 1.055556 | 2.03722308 | Zebrafish picornavirus 1 | 2304617 | Viruses | Viruses | 318 | 1.4899999999999995e-82 | NTclustered | gi|1990739381|tpg|BK011179.1| | 2304617 | g13022 | i0 | 96.373 | 3 | 193 | 7 | 100 | 0 | 1 | 193 | 2662 | 2470 | TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome | blastn | 579 | 318 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Zebrafish picornavirus 1 | |||
| 6399221 | 6399221 | PRJEB12982_P_NODE_9266_length_233_cov_1.951087_g9103_i0 | PRJEB12982 | 9266 | 233 | 1.951087 | 4.54603271 | Zebrafish picornavirus 1 | 2304617 | Viruses | Viruses | 381 | 2.3399999999999995e-101 | NTclustered | gi|1812398529|gb|MN524064.1| | 2304617 | g9103 | i0 | 96.137 | 3 | 233 | 9 | 100 | 0 | 1 | 233 | 6005 | 6237 | Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome | blastn | 699 | 381 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Zebrafish picornavirus 1 | |||
| 8948046 | 8948046 | PRJEB12982_P_NODE_7088_length_273_cov_1.227679_g6925_i0 | PRJEB12982 | 7088 | 273 | 1.227679 | 3.35156367 | Dicistroviridae sp. | 1955144 | Viruses | Viruses | 115 | 7.160000000000001e-29 | NR | XCO49366.1 | 1955144 | g6925 | i0 | 57.3 | 2.93406593406593 | 89 | 38 | 97.8 | 0 | 5 | 271 | 184 | 272 | XCO49366.1 MAG: putative ORF1 protein, partial [Dicistroviridae sp.] | diamond | 801 | 115 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Dicistroviridae | Dicistroviridae sp. | |||
| 16597802 | 16597802 | PRJEB12982_P_NODE_19914_length_163_cov_0.894737_g19751_i0 | PRJEB12982 | 19914 | 163 | 0.894737 | 1.45842131 | Sopidub virus | 3131684 | Viruses | Viruses | 134 | 4.72e-27 | NTclustered | gi|2717323145|gb|PP173985.1| | 3131684 | g19751 | i0 | 84.783 | 5.17177914110429 | 138 | 16 | 82 | 4 | 5 | 138 | 2212 | 2076 | MAG: Sopidub virus isolate SP1B_k141_213983 genomic sequence | blastn | 843 | 134 | 1 | Viruses | Orthornavirae | Pisuviricota | Duplopiviricetes | Durnavirales | Picobirnaviridae | Sopidub virus | |||
| 16597846 | 16597846 | PRJEB12982_P_NODE_4594_length_352_cov_1.178218_g4431_i0 | PRJEB12982 | 4594 | 352 | 1.178218 | 4.14732736 | Zebrafish picornavirus 1 | 2304617 | Viruses | Viruses | 595 | 1.2299999999999994e-165 | NTclustered | gi|2500378199|ref|NC_076245.1| | 2304617 | g4431 | i0 | 97.159 | 3 | 352 | 10 | 100 | 0 | 1 | 352 | 6636 | 6987 | Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome | blastn | 1056 | 595 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Zebrafish picornavirus 1 | |||
| 17872647 | 17872647 | PRJEB12982_P_NODE_4315_length_364_cov_1.298413_g4152_i0 | PRJEB12982 | 4315 | 364 | 1.298413 | 4.72622332 | Zebrafish picornavirus 1 | 2304617 | Viruses | Viruses | 645 | 1.2499999999999996e-180 | NTclustered | gi|1990739381|tpg|BK011179.1| | 2304617 | g4152 | i0 | 98.626 | 3.00824175824176 | 364 | 5 | 100 | 0 | 1 | 364 | 6060 | 5697 | TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome | blastn | 1095 | 645 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Zebrafish picornavirus 1 | |||
| 20421609 | 20421609 | PRJEB12982_P_NODE_17_length_3322_cov_6.748854_g15_i0 | PRJEB12982 | 17 | 3322 | 6.748854 | 224.19692988 | Picornavirales | 464095 | Viruses | Viruses | 504 | 1.7699999999999995e-158 | NR | NP_044946.1 | 64279 | g15 | i0 | 35.6 | 7.03943407585792 | 978 | 493 | 84.8 | 25 | 258 | 3074 | 16 | 895 | NP_044946.1 capsid polyprotein, partial [Drosophila C virus] | diamond | 23385 | 506 | 0.99604743083004 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Dicistroviridae | Cripavirus | Cripavirus drosophilae | ||
| 22973051 | 22973051 | PRJEB12982_P_NODE_9059_length_237_cov_1.047872_g8896_i0 | PRJEB12982 | 9059 | 237 | 1.047872 | 2.48345664 | Zebrafish picornavirus 1 | 2304617 | Viruses | Viruses | 372 | 1.44e-98 | NTclustered | gi|1812398529|gb|MN524064.1| | 2304617 | g8896 | i0 | 95.299 | 2.9789029535865 | 234 | 11 | 99 | 0 | 3 | 236 | 1890 | 2123 | Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome | blastn | 706 | 372 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Zebrafish picornavirus 1 | |||
| 26652896 | 26652896 | PRJEB12982_P_NODE_381_length_1267_cov_2.582102_g311_i0 | PRJEB12982 | 381 | 1267 | 2.582102 | 32.71523234 | Dicistroviridae sp. | 1955144 | Viruses | Viruses | 292 | 5.65e-84 | NR | ULF99809.1 | 1955144 | g311 | i0 | 39.1 | 1.02999210734017 | 435 | 245 | 99.4 | 9 | 7 | 1266 | 1033 | 1462 | ULF99809.1 MAG: replicase polyprotein [Dicistroviridae sp.] | diamond | 1305 | 292 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Dicistroviridae | Dicistroviridae sp. | |||
| 28416471 | 28416471 | PRJEB12982_P_NODE_2406_length_499_cov_2.093333_g2245_i0 | PRJEB12982 | 2406 | 499 | 2.093333 | 10.44573167 | Viruses | 10239 | Viruses | Viruses | 79.3 | 1.1e-13 | NR | WPV63180.1 | 3083669 | g2245 | i0 | 28.7 | 1.64128256513026 | 164 | 110 | 96.8 | 2 | 17 | 499 | 614 | 773 | WPV63180.1 MAG: RNA-dependent RNA polymerase [Wenzhou bat dicistrovirus 3] | diamond | 819 | 79.7 | 0.994981179422836 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Dicistroviridae | Wenzhou bat dicistrovirus 3 | |||
| 28669055 | 28669055 | PRJEB12982_P_NODE_2047_length_544_cov_2.109091_g1888_i0 | PRJEB12982 | 2047 | 544 | 2.109091 | 11.47345504 | Picornavirales | 464095 | Viruses | Viruses | 213 | 2.41e-60 | NR | ULF99869.1 | 1955141 | g1888 | i0 | 55.3 | 11.8455882352941 | 179 | 80 | 98.7 | 0 | 540 | 4 | 1519 | 1697 | ULF99869.1 MAG: hypothetical protein 1 [Cripavirus sp.] | diamond | 6444 | 215 | 0.990697674418605 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Dicistroviridae | Cripavirus | Cripavirus sp. |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;