RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJEB12982", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 7 ✖

tax_phylum 1

  • Acidobacteriota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJEB12982 · 7 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26931790 26931790 PRJEB12982_P_NODE_16342_length_169_cov_2.025000_g16179_i0 PRJEB12982 16342 169 2.025 3.42225 FCB group 1783270 Bacteria Bacteria 55.1 6.17e-7   NR MBI1355374.1 1978231 g16179 i0 89.3 10.6508875739645 28 3 49.7 0 1 84 854 881 MBI1355374.1 pyruvate, phosphate dikinase [Acidobacteriota bacterium] diamond 1800 55.5 0.992792792792793 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27184588 27184588 PRJEB12982_P_NODE_19982_length_163_cov_0.894737_g19819_i0 PRJEB12982 19982 163 0.894737 1.45842131 Pseudomonadati 3379134 Bacteria Bacteria 46.2 6.95e-4   NR HEX4750205.1 2212468 g19819 i0 46 2.68711656441718 50 27 92 0 6 155 101 150 HEX4750205.1 tetratricopeptide repeat protein [Bryobacteraceae bacterium] diamond 438 46.6 0.991416309012876 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
28517485 28517485 PRJEB12982_P_NODE_8247_length_250_cov_1.189055_g8084_i0 PRJEB12982 8247 250 1.189055 2.9726375 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 70.5 5.03e-12   NR MDR3737318.1 2052142 g8084 i0 49.4 0.924 77 38 91.2 1 23 250 221 297 MDR3737318.1 hypothetical protein [Acidobacteriaceae bacterium] diamond 231 70.5 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
28574146 28574146 PRJEB12982_P_NODE_17807_length_166_cov_0.871795_g17644_i0 PRJEB12982 17807 166 0.871795 1.4471797 Bacteria 2 Bacteria Bacteria 100 1.27e-25   NR MDQ3132141.1 1978231 g17644 i0 96.2 1.91566265060241 53 2 95.8 0 6 164 42 94 MDQ3132141.1 hemerythrin domain-containing protein [Acidobacteriota bacterium] diamond 318 100 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30633170 30633170 PRJEB12982_P_NODE_19793_length_163_cov_0.894737_g19630_i0 PRJEB12982 19793 163 0.894737 1.45842131 Acidobacteriota bacterium 1978231 Bacteria Bacteria 84 7.26e-18   NR MBU4203058.1 1978231 g19630 i0 72.2 9.93865030674847 54 15 99.4 0 162 1 98 151 MBU4203058.1 acetate/propionate family kinase [Acidobacteriota bacterium] diamond 1620 84 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31771376 31771376 PRJEB12982_P_NODE_19217_length_164_cov_0.886957_g19054_i0 PRJEB12982 19217 164 0.886957 1.45460948 Acidobacteriota bacterium 1978231 Bacteria Bacteria 43.5 0.00313   NR TDI43280.1 1978231 g19054 i0 50 1.51829268292683 34 17 62.2 0 123 22 73 106 TDI43280.1 MAG: hypothetical protein E2P02_11605 [Acidobacteriota bacterium] diamond 249 43.5 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32151122 32151122 PRJEB12982_P_NODE_1418_length_650_cov_2.068220_g1276_i0 PRJEB12982 1418 650 2.06822 13.44343 Acidobacteriota bacterium 1978231 Bacteria Bacteria 135 4.889999999999999e-37   NR MDQ7008653.1 1978231 g1276 i0 82.4 0.42 91 16 42 0 86 358 19 109 MDQ7008653.1 NFYB/HAP3 family transcription factor subunit [Acidobacteriota bacterium] diamond 273 135 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;