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contig_metadata

23 rows where bioproject = "PRJEB12982" and tax_kingdom = "Orthornavirae"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 23 ✖

bioproject 1

  • PRJEB12982 · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
985709 985709 PRJEB12982_P_NODE_641_length_1001_cov_19.754202_g546_i0 PRJEB12982 641 1001 19.754202 197.73956202 Alphainfluenzavirus 197911 Viruses Viruses 1836 0   NTclustered gi|2164748429|gb|OL831185.1| 11320 g546 i0 99.8 99.2997002997003 1000 2 99 0 2 1001 5 1004 Influenza A virus (A/India/H1N1-P2/2020(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds blastn 99399 1836 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
1295220 1295220 PRJEB12982_P_NODE_3582_length_405_cov_1.522472_g3419_i0 PRJEB12982 3582 405 1.522472 6.1660116 Zebrafish picornavirus 1 2304617 Viruses Viruses 625 1.8299999999999995e-174   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g3419 i0 94.554 2.99259259259259 404 22 99 0 1 404 5149 5552 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 1212 625 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
5123264 5123264 PRJEB12982_P_NODE_13185_length_193_cov_1.055556_g13022_i0 PRJEB12982 13185 193 1.055556 2.03722308 Zebrafish picornavirus 1 2304617 Viruses Viruses 318 1.4899999999999995e-82   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g13022 i0 96.373 3 193 7 100 0 1 193 2662 2470 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 579 318 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
5123300 5123300 PRJEB12982_P_NODE_15485_length_175_cov_2.428571_g15322_i0 PRJEB12982 15485 175 2.428571 4.24999925 Mitovirus sp. 2587224 Viruses Viruses 171 3.9e-38   NTclustered gi|1698234317|gb|MN033515.1| 2587224 g15322 i0 94.545 5.35428571428571 110 6 63 0 66 175 112 3 MAG: Mitovirus sp. isolate H1_Rhizo_26_FD_scaffold_6751 sequence blastn 937 171 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.
6088820 6088820 PRJEB12982_P_NODE_825_length_871_cov_60.521898_g712_i0 PRJEB12982 825 871 60.521898 527.14573158 Alphainfluenzavirus 197911 Viruses Viruses 1605 0   NTclustered gi|324878|gb|M12597.1|FLANSW 382835 g712 i0 100 98.7336394948335 869 0 99 0 1 869 869 1 Influenza A virus (A/WSN/1933(H1N1)) nonstructural protein 1 gene, complete cds blastn 85997 1605 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
6399221 6399221 PRJEB12982_P_NODE_9266_length_233_cov_1.951087_g9103_i0 PRJEB12982 9266 233 1.951087 4.54603271 Zebrafish picornavirus 1 2304617 Viruses Viruses 381 2.3399999999999995e-101   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g9103 i0 96.137 3 233 9 100 0 1 233 6005 6237 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 699 381 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
8948046 8948046 PRJEB12982_P_NODE_7088_length_273_cov_1.227679_g6925_i0 PRJEB12982 7088 273 1.227679 3.35156367 Dicistroviridae sp. 1955144 Viruses Viruses 115 7.160000000000001e-29   NR XCO49366.1 1955144 g6925 i0 57.3 2.93406593406593 89 38 97.8 0 5 271 184 272 XCO49366.1 MAG: putative ORF1 protein, partial [Dicistroviridae sp.] diamond 801 115 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.
9913859 9913859 PRJEB12982_P_NODE_228_length_1548_cov_61.446298_g189_i0 PRJEB12982 228 1548 61.446298 951.18869304 root 1 Root_unresolved Root_unresolved 2846 0   NTclustered gi|2164728774|gb|OL831136.1| 11320 g189 i0 99.935 99.1395348837209 1544 1 99 0 5 1548 1 1544 Influenza A virus (A/India/H1N1p2/2020(H1N1)) segment 5 nucleocapsid protein (NP) gene, complete cds blastn 153468 2848 0.999297752808989 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
12464834 12464834 PRJEB12982_P_NODE_3690_length_398_cov_11.593123_g3527_i0 PRJEB12982 3690 398 11.593123 46.14062954 root 1 Root_unresolved Root_unresolved 462 1.4899999999999998e-125   NTclustered gi|94960382|gb|CY010793.1| 370129 g3527 i0 100 96.2211055276382 250 0 96 0 149 398 1946 2195 Influenza A virus (A/WSN/1933 TS61(H1N1)) segment 3, complete sequence blastn 38296 462 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
13739138 13739138 PRJEB12982_P_NODE_71_length_2209_cov_5.237963_g59_i0 PRJEB12982 71 2209 5.237963 115.70660267 root 1 Root_unresolved Root_unresolved 4052 0   NTclustered gi|2164728769|gb|OL831134.1| 11320 g59 i0 99.819 99.4889090086012 2206 4 99 0 4 2209 1 2206 Influenza A virus (A/India/H1N1p2/2020(H1N1)) segment 3 polymerase PA (PA) and PA-X protein (PA-X) genes, complete cds blastn 219771 4074 0.994599901816397 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
16597802 16597802 PRJEB12982_P_NODE_19914_length_163_cov_0.894737_g19751_i0 PRJEB12982 19914 163 0.894737 1.45842131 Sopidub virus 3131684 Viruses Viruses 134 4.72e-27   NTclustered gi|2717323145|gb|PP173985.1| 3131684 g19751 i0 84.783 5.17177914110429 138 16 82 4 5 138 2212 2076 MAG: Sopidub virus isolate SP1B_k141_213983 genomic sequence blastn 843 134 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae   Sopidub virus
16597846 16597846 PRJEB12982_P_NODE_4594_length_352_cov_1.178218_g4431_i0 PRJEB12982 4594 352 1.178218 4.14732736 Zebrafish picornavirus 1 2304617 Viruses Viruses 595 1.2299999999999994e-165   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g4431 i0 97.159 3 352 10 100 0 1 352 6636 6987 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 1056 595 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
17872647 17872647 PRJEB12982_P_NODE_4315_length_364_cov_1.298413_g4152_i0 PRJEB12982 4315 364 1.298413 4.72622332 Zebrafish picornavirus 1 2304617 Viruses Viruses 645 1.2499999999999996e-180   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g4152 i0 98.626 3.00824175824176 364 5 100 0 1 364 6060 5697 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 1095 645 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
18837497 18837497 PRJEB12982_P_NODE_315_length_1371_cov_15.780635_g258_i0 PRJEB12982 315 1371 15.780635 216.35250585 root 1 Root_unresolved Root_unresolved 2483 0   NTclustered gi|2164728776|gb|OL831137.1| 11320 g258 i0 99.559 96.054704595186 1362 6 99 0 1 1362 1363 2 Influenza A virus (A/India/H1N1p2/2020(H1N1)) segment 6 neuraminidase (NA) gene, complete cds blastn 131691 2494 0.995589414595028 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
20421609 20421609 PRJEB12982_P_NODE_17_length_3322_cov_6.748854_g15_i0 PRJEB12982 17 3322 6.748854 224.19692988 Picornavirales 464095 Viruses Viruses 504 1.7699999999999995e-158   NR NP_044946.1 64279 g15 i0 35.6 7.03943407585792 978 493 84.8 25 258 3074 16 895 NP_044946.1 capsid polyprotein, partial [Drosophila C virus] diamond 23385 506 0.99604743083004 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Cripavirus Cripavirus drosophilae
21697665 21697665 PRJEB12982_P_NODE_18318_length_165_cov_0.879310_g18155_i0 PRJEB12982 18318 165 0.87931 1.4508615 Chrocagosk virus 3129397 Viruses Viruses 226 7.679999999999999e-55   NTclustered gi|2717317479|gb|PP171845.1| 3129397 g18155 i0 97.037 79.0363636363636 135 3 81 1 32 165 326 192 MAG: Chrocagosk virus isolate CC1A_k141_83719 genomic sequence blastn 13041 226 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Chrocagosk virus
22662615 22662615 PRJEB12982_P_NODE_158_length_1758_cov_30.121123_g127_i0 PRJEB12982 158 1758 30.121123 529.52934234 Alphainfluenzavirus 197911 Viruses Viruses 3197 0   NTclustered gi|94960370|gb|CY010788.1| 370129 g127 i0 99.828 98.773606370876 1741 2 99 1 1 1741 1740 1 Influenza A virus (A/WSN/1933 TS61(H1N1)) segment 4, complete sequence blastn 173644 3208 0.996571072319202 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
22662643 22662643 PRJEB12982_P_NODE_58_length_2325_cov_6.749121_g48_i0 PRJEB12982 58 2325 6.749121 156.91706325 root 1 Root_unresolved Root_unresolved 4266 0   NTclustered gi|2164748415|gb|OL831179.1| 11320 g48 i0 99.828 99.4756989247312 2322 4 99 0 4 2325 1 2322 Influenza A virus (A/India/H1N1-P2/2020(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds blastn 231281 4285 0.995565927654609 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
22973051 22973051 PRJEB12982_P_NODE_9059_length_237_cov_1.047872_g8896_i0 PRJEB12982 9059 237 1.047872 2.48345664 Zebrafish picornavirus 1 2304617 Viruses Viruses 372 1.44e-98   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g8896 i0 95.299 2.9789029535865 234 11 99 0 3 236 1890 2123 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 706 372 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
25211772 25211772 PRJEB12982_P_NODE_60_length_2316_cov_8.075871_g50_i0 PRJEB12982 60 2316 8.075871 187.03717236 root 1 Root_unresolved Root_unresolved 4259 0   NTclustered gi|2164728766|gb|OL831133.1| 11320 g50 i0 99.87 99.4365284974093 2315 3 99 0 1 2315 2315 1 Influenza A virus (A/India/H1N1p2/2020(H1N1)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds blastn 230295 4277 0.995791442599953 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
26652896 26652896 PRJEB12982_P_NODE_381_length_1267_cov_2.582102_g311_i0 PRJEB12982 381 1267 2.582102 32.71523234 Dicistroviridae sp. 1955144 Viruses Viruses 292 5.65e-84   NR ULF99809.1 1955144 g311 i0 39.1 1.02999210734017 435 245 99.4 9 7 1266 1033 1462 ULF99809.1 MAG: replicase polyprotein [Dicistroviridae sp.] diamond 1305 292 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.
28416471 28416471 PRJEB12982_P_NODE_2406_length_499_cov_2.093333_g2245_i0 PRJEB12982 2406 499 2.093333 10.44573167 Viruses 10239 Viruses Viruses 79.3 1.1e-13   NR WPV63180.1 3083669 g2245 i0 28.7 1.64128256513026 164 110 96.8 2 17 499 614 773 WPV63180.1 MAG: RNA-dependent RNA polymerase [Wenzhou bat dicistrovirus 3] diamond 819 79.7 0.994981179422836 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Wenzhou bat dicistrovirus 3
28669055 28669055 PRJEB12982_P_NODE_2047_length_544_cov_2.109091_g1888_i0 PRJEB12982 2047 544 2.109091 11.47345504 Picornavirales 464095 Viruses Viruses 213 2.41e-60   NR ULF99869.1 1955141 g1888 i0 55.3 11.8455882352941 179 80 98.7 0 540 4 1519 1697 ULF99869.1 MAG: hypothetical protein 1 [Cripavirus sp.] diamond 6444 215 0.990697674418605 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Cripavirus Cripavirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;