RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB12982", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB12982 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24246857 24246857 PRJEB12982_P_NODE_6760_length_281_cov_1.034483_g6597_i0 PRJEB12982 6760 281 1.034483 2.90689723 Oscarella lobularis 121494 Porifera other_Eukaryota 112 1.6100000000000002e-27   NR XP_065838198.1 121494 g6597 i0 54.9 3.90747330960854 82 37 87.5 0 251 6 239 320 XP_065838198.1 uncharacterized protein [Oscarella lobularis] diamond 1098 112 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis
30127556 30127556 PRJEB12982_P_NODE_18332_length_165_cov_0.879310_g18169_i0 PRJEB12982 18332 165 0.87931 1.4508615 Oscarella lobularis 121494 Porifera other_Eukaryota 43.5 0.00645   NR XP_065845841.1 121494 g18169 i0 46.9 0.890909090909091 49 26 89.1 0 149 3 163 211 XP_065845841.1 uncharacterized protein [Oscarella lobularis] diamond 147 43.5 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis
32751344 32751344 PRJEB12982_P_NODE_18840_length_164_cov_0.886957_g18677_i0 PRJEB12982 18840 164 0.886957 1.45460948 Oopsacas minuta 111878 Porifera other_Eukaryota 70.9 1.29e-12   NR KAI6654657.1 111878 g18677 i0 58 0.914634146341463 50 21 91.5 0 164 15 239 288 KAI6654657.1 Beta-1,3-glucan-binding protein-like [Oopsacas minuta] diamond 150 70.9 1 Eukaryota Opisthokonta Metazoa Porifera Hexactinellida Lyssacinosida Leucopsacidae Oopsacas Oopsacas minuta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;