RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB12982", tax_kingdom = "Metazoa" and tax_phylum = "Hemichordata"

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tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB12982 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30633171 30633171 PRJEB12982_P_NODE_20893_length_161_cov_0.910714_g20730_i0 PRJEB12982 20893 161 0.910714 1.46624954 Ptychodera flava 63121 Hemichordata other_Eukaryota 62.4 1.59e-10   NR XP_070532776.1 63121 g20730 i0 58 0.93167701863354 50 19 93.2 1 154 5 5 52 XP_070532776.1 large ribosomal subunit protein eL28-like [Ptychodera flava] diamond 150 62.4 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava
32182794 32182794 PRJEB12982_P_NODE_19618_length_163_cov_0.894737_g19455_i0 PRJEB12982 19618 163 0.894737 1.45842131 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 87.4 1.9e-19   NR XP_002739201.2 10224 g19455 i0 72.2 2.98159509202454 54 15 99.4 0 2 163 56 109 XP_002739201.2 PREDICTED: isopentenyl-diphosphate Delta-isomerase 1-like [Saccoglossus kowalevskii] diamond 486 87.4 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;