RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB12982", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB12982 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17872611 17872611 PRJEB12982_P_NODE_20175_length_162_cov_0.991150_g20012_i0 PRJEB12982 20175 162 0.99115 1.605663 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 154 3.5900000000000004e-33   NTclustered gi|2037992749|ref|XM_041609273.1| 7654 g20012 i0 83.951 62.5740740740741 162 22 99 3 2 162 1918 1760 PREDICTED: Lytechinus variegatus polyubiquitin-C-like (LOC121415894), mRNA blastn 10137 154 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
24246720 24246720 PRJEB12982_P_NODE_16280_length_170_cov_1.264463_g16117_i0 PRJEB12982 16280 170 1.264463 2.1495871 Acanthaster planci 133434 Echinodermata other_Eukaryota 113 6.430000000000001e-21   NTclustered gi|1229140146|ref|XM_022226493.1| 133434 g16117 i0 88.298 44.2411764705882 94 11 55 0 1 94 195 102 PREDICTED: Acanthaster planci tubulin beta-4B chain (LOC110974700), mRNA blastn 7521 113 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
28043789 28043789 PRJEB12982_P_NODE_20225_length_162_cov_0.902655_g20062_i0 PRJEB12982 20225 162 0.902655 1.4623011 Asterias rubens 7604 Echinodermata other_Eukaryota 46.6 5.25e-4   NR XP_033646116.1 7604 g20062 i0 41.5 0.981481481481482 53 31 98.1 0 160 2 189 241 XP_033646116.1 transmembrane protein 53-like [Asterias rubens] diamond 159 46.6 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;