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contig_metadata

22 rows where bioproject = "PRJEB12982" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 22 ✖

bioproject 1

  • PRJEB12982 · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7673132 7673132 PRJEB12982_P_NODE_16927_length_167_cov_0.864407_g16764_i0 PRJEB12982 16927 167 0.864407 1.44355969 Auxenochlorella protothecoides 3075 Plants Plants 302 1.2600000000000001e-77   NTclustered gi|760439036|ref|XM_011398285.1| 3075 g16764 i0 99.398 0.994011976047904 166 1 99 0 1 166 168 333 Auxenochlorella protothecoides hypothetical protein partial mRNA blastn 166 302 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
8947846 8947846 PRJEB12982_P_NODE_12968_length_194_cov_2.441379_g12805_i0 PRJEB12982 12968 194 2.441379 4.73627526 Monoraphidium neglectum 145388 Plants Plants 132 2.09e-26   NTclustered gi|926787363|ref|XM_014046702.1| 145388 g12805 i0 90.099 12.0824742268041 101 10 52 0 1 101 793 693 Monoraphidium neglectum Calreticulin Flags: Precursor mRNA blastn 2344 132 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
11189030 11189030 PRJEB12982_P_NODE_21169_length_161_cov_0.910714_g21006_i0 PRJEB12982 21169 161 0.910714 1.46624954 Eukaryota 2759 Plants Plants 217 4.48e-52   NTclustered gi|371782091|emb|HE610123.1| 3107 g21006 i0 92.308 96.8944099378882 156 7 97 3 1 156 5112 4962 Hydrodictyon reticulatum 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain M2243 blastn 15600 217 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Hydrodictyaceae Hydrodictyon Hydrodictyon reticulatum
12774648 12774648 PRJEB12982_P_NODE_7871_length_257_cov_2.096154_g7708_i0 PRJEB12982 7871 257 2.096154 5.38711578 Chlamydomonas incerta 51695 Plants Plants 174 4.78e-39   NTclustered gi|74272614|gb|DQ122872.1| 51695 g7708 i0 79.518 4.6147859922179 249 47 96 4 1 247 357 603 Chlamydomonas incerta mitochondrial ADP/ATP translocator (ANT) mRNA, complete cds; nuclear gene for mitochondrial product blastn 1186 174 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
15323118 15323118 PRJEB12982_P_NODE_17953_length_166_cov_0.871795_g17790_i0 PRJEB12982 17953 166 0.871795 1.4471797 Chlamydomonas reinhardtii 3055 Plants Plants 135 1.34e-27   NTclustered gi|2082256823|ref|XM_001690323.2| 3055 g17790 i0 83.803 4.58433734939759 142 23 86 0 25 166 697 556 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_10g439150v5), mRNA blastn 761 135 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
16597751 16597751 PRJEB12982_P_NODE_17514_length_166_cov_0.871795_g17351_i0 PRJEB12982 17514 166 0.871795 1.4471797 Auxenochlorella protothecoides 3075 Plants Plants 300 4.5e-77   NTclustered gi|760436786|ref|XM_011397160.1| 3075 g17351 i0 99.394 0.993975903614458 165 1 99 0 2 166 423 259 Auxenochlorella protothecoides putative leucine-rich repeat receptor-like protein kinase partial mRNA blastn 165 300 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
17872445 17872445 PRJEB12982_P_NODE_10175_length_221_cov_1.866279_g10012_i0 PRJEB12982 10175 221 1.866279 4.1244765900000004 Auxenochlorella protothecoides 3075 Plants Plants 272 1.38e-68   NTclustered gi|760446256|ref|XM_011401895.1| 3075 g10012 i0 100 0.841628959276018 147 0 67 0 1 147 147 1 Auxenochlorella protothecoides hypothetical protein partial mRNA blastn 186 272 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
19146538 19146538 PRJEB12982_P_NODE_5096_length_331_cov_1.645390_g4933_i0 PRJEB12982 5096 331 1.64539 5.4462409 Auxenochlorella protothecoides 3075 Plants Plants 492 1.55e-134   NTclustered gi|760449952|ref|XM_011403743.1| 3075 g4933 i0 99.265 0.821752265861027 272 2 82 0 1 272 272 1 Auxenochlorella protothecoides hypothetical protein partial mRNA blastn 272 492 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
22972920 22972920 PRJEB12982_P_NODE_18199_length_165_cov_0.879310_g18036_i0 PRJEB12982 18199 165 0.87931 1.4508615 Auxenochlorella protothecoides 3075 Plants Plants 305 9.59e-79   NTclustered gi|760441632|ref|XM_011399583.1| 3075 g18036 i0 100 1 165 0 100 0 1 165 291 455 Auxenochlorella protothecoides hypothetical protein partial mRNA blastn 165 305 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
26937963 26937963 PRJEB12982_P_NODE_21222_length_161_cov_0.910714_g21059_i0 PRJEB12982 21222 161 0.910714 1.46624954 Micractinium tetrahymenae 2728915 Plants Plants 44.3 0.00344   NR KAL4434376.1 2728915 g21059 i0 45.2 1.54658385093168 42 23 78.3 0 8 133 215 256 KAL4434376.1 hypothetical protein ABPG75_000817 [Micractinium tetrahymenae] diamond 249 44.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium tetrahymenae
27279653 27279653 PRJEB12982_P_NODE_19143_length_164_cov_0.886957_g18980_i0 PRJEB12982 19143 164 0.886957 1.45460948 Chlorophyta 3041 Plants Plants 75.9 2.35e-14   NR KAI8476169.1 39955 g18980 i0 66.7 4.9390243902439 54 18 98.8 0 1 162 226 279 KAI8476169.1 MAG: mitochondrial carrier protein [Monoraphidium minutum] diamond 810 76.6 0.990861618798956 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium minutum
27570106 27570106 PRJEB12982_P_NODE_12884_length_195_cov_1.397260_g12721_i0 PRJEB12982 12884 195 1.39726 2.724657 Chlamydomonas eustigma 1157962 Plants Plants 130 2.09e-36   NR GAX80371.1 1157962 g12721 i0 90.6 1.96923076923077 64 6 98.5 0 2 193 140 203 GAX80371.1 hypothetical protein CEUSTIGMA_g7810.t1 [Chlamydomonas eustigma] diamond 384 130 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
28201443 28201443 PRJEB12982_P_NODE_20286_length_162_cov_0.902655_g20123_i0 PRJEB12982 20286 162 0.902655 1.4623011 Micractinium conductrix 554055 Plants Plants 69.7 3.92e-12   NR PSC71066.1 554055 g20123 i0 60.4 2.88888888888889 48 19 88.9 0 162 19 52 99 PSC71066.1 argonaute 1 isoform A [Micractinium conductrix] diamond 468 69.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium conductrix
28700601 28700601 PRJEB12982_P_NODE_11807_length_205_cov_0.980769_g11644_i0 PRJEB12982 11807 205 0.980769 2.01057645 Eukaryota 2759 Plants Plants 64.7 4.09e-10   NR KAK9811648.1 41462 g11644 i0 50 3.74634146341463 66 33 96.6 0 8 205 162 227 KAK9811648.1 hypothetical protein WJX72_007649 [[Myrmecia] bisecta] diamond 768 64.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
28833088 28833088 PRJEB12982_P_NODE_18568_length_165_cov_0.879310_g18405_i0 PRJEB12982 18568 165 0.87931 1.4508615 [Myrmecia] bisecta 41462 Plants Plants 53.9 7.87e-7   NR KAK9811451.1 41462 g18405 i0 75.8 0.6 33 8 60 0 3 101 172 204 KAK9811451.1 hypothetical protein WJX72_004104 [[Myrmecia] bisecta] diamond 99 53.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
30001606 30001606 PRJEB12982_P_NODE_16871_length_167_cov_0.864407_g16708_i0 PRJEB12982 16871 167 0.864407 1.44355969 Tetradesmus obliquus 3088 Plants Plants 44.7 0.00276   NR WIA22068.1 3088 g16708 i0 32.7 3.48502994011976 52 34 93.4 1 3 158 173 223 WIA22068.1 hypothetical protein OEZ85_004413 [Tetradesmus obliquus] diamond 582 44.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
30001607 30001607 PRJEB12982_P_NODE_17171_length_167_cov_0.864407_g17008_i0 PRJEB12982 17171 167 0.864407 1.44355969 Prototheca wickerhamii 3111 Plants Plants 46.2 1.36e-4   NR KAK2079900.1 3111 g17008 i0 50.9 0.988023952095808 55 24 98.8 1 167 3 36 87 KAK2079900.1 hypothetical protein QBZ16_002295 [Prototheca wickerhamii] diamond 165 46.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
30759808 30759808 PRJEB12982_P_NODE_13474_length_190_cov_2.170213_g13311_i0 PRJEB12982 13474 190 2.170213 4.1234047 Volvox reticuliferus 1737510 Plants Plants 43.9 0.00699   NR GIL96981.1 1737510 g13311 i0 32.7 1.64210526315789 52 35 82.1 0 164 9 68 119 GIL96981.1 hypothetical protein Vretimale_2708, partial [Volvox reticuliferus] diamond 312 43.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox reticuliferus
31233510 31233510 PRJEB12982_P_NODE_7595_length_262_cov_1.906103_g7432_i0 PRJEB12982 7595 262 1.906103 4.99398986 Chlorella desiccata (nom. nud.) 1650286 Plants Plants 65.5 7.9e-11   NR KAH7617709.1 1650286 g7432 i0 46.5 0.984732824427481 86 43 98.5 2 260 3 78 160 KAH7617709.1 putative 60S ribosomal protein L18a-2 [Chlorella desiccata (nom. nud.)] diamond 258 65.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris sp. 'desiccata'
31265361 31265361 PRJEB12982_P_NODE_20395_length_162_cov_0.902655_g20232_i0 PRJEB12982 20395 162 0.902655 1.4623011 Monoraphidium minutum 39955 Plants Plants 65.1 1.21e-11   NR KAI8473821.1 39955 g20232 i0 61.1 1 54 21 100 0 162 1 8 61 KAI8473821.1 MAG: ribosomal protein L14 component of cytosolic 80S ribosome and 60S large subunit [Monoraphidium minutum] diamond 162 65.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium minutum
31455177 31455177 PRJEB12982_P_NODE_15316_length_177_cov_1.195312_g15153_i0 PRJEB12982 15316 177 1.195312 2.11570224 Monoraphidium neglectum 145388 Plants Plants 80.9 1.35e-17   NR XP_013899805.1 145388 g15153 i0 66.1 5 59 20 100 0 1 177 54 112 XP_013899805.1 40S ribosomal protein S15 [Monoraphidium neglectum] diamond 885 80.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
32713472 32713472 PRJEB12982_P_NODE_16000_length_172_cov_1.243902_g15837_i0 PRJEB12982 16000 172 1.243902 2.13951144 Chlorophyta 3041 Plants Plants 76.3 5.93e-15   NR KAG2482049.1 47281 g15837 i0 70.8 12.5581395348837 48 14 83.7 0 28 171 1 48 KAG2482049.1 hypothetical protein HYH03_018999 [Edaphochlamys debaryana] diamond 2160 76.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales   Edaphochlamys Edaphochlamys debaryana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;