RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB12982", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB12982 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27127455 27127455 PRJEB12982_P_NODE_3042_length_441_cov_1.660714_g2881_i0 PRJEB12982 3042 441 1.660714 7.32374874 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 81.6 2.02e-16   NR XP_002784356.1 423536 g2881 i0 31.8 1.82993197278912 129 88 87.8 0 431 45 19 147 XP_002784356.1 ubiquitin, putative [Perkinsus marinus ATCC 50983] diamond 807 81.6 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
27349348 27349348 PRJEB12982_P_NODE_3603_length_404_cov_1.433803_g3440_i0 PRJEB12982 3603 404 1.433803 5.79256412 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 90.1 7.06e-19   NR TEB19254.1 2494336 g3440 i0 40.9 1.01732673267327 137 73 95.8 2 17 403 51 187 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 411 90.1 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
27791306 27791306 PRJEB12982_P_NODE_15564_length_175_cov_1.214286_g15401_i0 PRJEB12982 15564 175 1.214286 2.1250005 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 67 2.12e-11   NR TEB19254.1 2494336 g15401 i0 63.8 0.805714285714286 47 17 80.6 0 171 31 217 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 141 67 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
28738443 28738443 PRJEB12982_P_NODE_16687_length_167_cov_1.728814_g16524_i0 PRJEB12982 16687 167 1.728814 2.88711938 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 56.2 2.3e-7   NR KAF4666413.1 32597 g16524 i0 48.9 6.4311377245509 47 23 84.4 1 149 9 102 147 KAF4666413.1 hypothetical protein FOZ61_009789 [Perkinsus olseni] diamond 1074 56.2 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;