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contig_metadata

4 rows where bioproject = "PRJEB12982", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB12982 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17872543 17872543 PRJEB12982_P_NODE_16675_length_167_cov_1.872881_g16512_i0 PRJEB12982 16675 167 1.872881 3.12771127 Rosculus hawesi 2231161 SAR_Eukaryotes SAR_Eukaryotes 309 7.53e-80   NTclustered gi|1402550478|gb|MH488764.1| 2231161 g16512 i0 100 31.3233532934132 167 0 100 0 1 167 1158 992 Rosculus hawesi isolate MSUPP161R small subunit ribosomal RNA gene, partial sequence blastn 5231 309 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus hawesi
21697660 21697660 PRJEB12982_P_NODE_17938_length_166_cov_0.871795_g17775_i0 PRJEB12982 17938 166 0.871795 1.4471797 Rosculus hawesi 2231161 SAR_Eukaryotes SAR_Eukaryotes 307 2.69e-79   NTclustered gi|1402550478|gb|MH488764.1| 2231161 g17775 i0 100 3.01807228915663 166 0 100 0 1 166 132 297 Rosculus hawesi isolate MSUPP161R small subunit ribosomal RNA gene, partial sequence blastn 501 307 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus hawesi
28991322 28991322 PRJEB12982_P_NODE_3748_length_395_cov_1.401734_g3585_i0 PRJEB12982 3748 395 1.401734 5.5368493 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 84.3 1.16e-16   NR MES1912576.1 1215613 g3585 i0 40 1.29113924050633 90 54 68.4 0 331 62 185 274 MES1912576.1 hypothetical protein [Cercozoa sp. M6MM] diamond 510 84.3 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
32214408 32214408 PRJEB12982_P_NODE_20398_length_162_cov_0.902655_g20235_i0 PRJEB12982 20398 162 0.902655 1.4623011 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 42.4 0.0169   NR MES1914904.1 1215613 g20235 i0 42.3 0.962962962962963 52 29 96.3 1 6 161 491 541 MES1914904.1 hypothetical protein [Cercozoa sp. M6MM] diamond 156 42.4 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;