RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where bioproject = "PRJEB12982", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 7 ✖

tax_clade 1

bioproject 1

  • PRJEB12982 · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7673189 7673189 PRJEB12982_P_NODE_19987_length_163_cov_0.894737_g19824_i0 PRJEB12982 19987 163 0.894737 1.45842131 Theileria equi 5872 SAR_Eukaryotes SAR_Eukaryotes 121 3.669999999999999e-23   NTclustered gi|510901075|ref|XM_004829177.1| 1537102 g19824 i0 81.507 6.58895705521472 146 27 90 0 13 158 289 434 Theileria equi strain WA histone H2a, putative (BEWA_024170), mRNA blastn 1074 121 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria equi
14049034 14049034 PRJEB12982_P_NODE_15972_length_172_cov_1.243902_g15809_i0 PRJEB12982 15972 172 1.243902 2.13951144 Eimeria maxima 5804 SAR_Eukaryotes SAR_Eukaryotes 110 8.44e-20   NTclustered gi|915131123|ref|XM_013480021.1| 5804 g15809 i0 88.764 5.91860465116279 89 10 52 0 53 141 1 89 Eimeria maxima ribosomal protein L5, putative partial mRNA blastn 1018 110 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
14049172 14049172 PRJEB12982_P_NODE_6392_length_290_cov_1.161826_g6229_i0 PRJEB12982 6392 290 1.161826 3.3692954 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 137 3.53e-39   NR EUD71171.1 138298 g6229 i0 69.9 6.65172413793103 93 26 96.2 1 12 290 1 91 EUD71171.1 eukaryotic translation initiation factor 5A-2 [Plasmodium vinckei petteri] diamond 1929 137 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei
17563554 17563554 PRJEB12982_P_NODE_7714_length_260_cov_1.497630_g7551_i0 PRJEB12982 7714 260 1.49763 3.893838 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 409 1.22e-109   NTclustered gi|2866450391|gb|PQ722880.1| 35084 g7551 i0 95.019 100.973076923077 261 12 100 1 1 260 753 1013 Babesia sp. isolate YN-4 WX-T-162 small subunit ribosomal RNA gene, partial sequence blastn 26253 409 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia sp.
19146589 19146589 PRJEB12982_P_NODE_9076_length_236_cov_2.010695_g8913_i0 PRJEB12982 9076 236 2.010695 4.7452402 Babesia sp. 35084 SAR_Eukaryotes SAR_Eukaryotes 409 1.09e-109   NTclustered gi|2866450391|gb|PQ722880.1| 35084 g8913 i0 97.881 100.661016949153 236 5 100 0 1 236 292 57 Babesia sp. isolate YN-4 WX-T-162 small subunit ribosomal RNA gene, partial sequence blastn 23756 409 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia sp.
20421558 20421558 PRJEB12982_P_NODE_15477_length_175_cov_3.539683_g15314_i0 PRJEB12982 15477 175 3.539683 6.19444525 Babesia caballi 5871 SAR_Eukaryotes SAR_Eukaryotes 154 3.93e-33   NTclustered gi|2794932840|ref|XM_067857025.1| 5871 g15314 i0 91.15 25.44 113 10 65 0 58 170 778 890 Babesia caballi syntaxin 5 (BcabD6B2_04900), partial mRNA blastn 4452 154 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia caballi
29622035 29622035 PRJEB12982_P_NODE_9090_length_236_cov_1.363636_g8927_i0 PRJEB12982 9090 236 1.363636 3.21818096 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 92 3.53e-21   NR XP_013233901.1 5802 g8927 i0 61.1 12.521186440678 72 28 91.5 0 218 3 90 161 XP_013233901.1 40S ribosomal protein S9, putative [Eimeria tenella] diamond 2955 92 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;