RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB12982", tax_clade = "Metamonada" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 4 ✖

tax_phylum 1

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJEB12982 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28706953 28706953 PRJEB12982_P_NODE_14967_length_179_cov_1.176923_g14804_i0 PRJEB12982 14967 179 1.176923 2.10669217 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 57.4 9.91e-8   NR KAJ6232103.1 1746091 g14804 i0 48.1 3.53631284916201 54 26 87.2 1 158 3 188 241 KAJ6232103.1 cofilin/actin-depolymerizing factor homolog-related [Anaeramoeba flamelloides] diamond 633 57.4 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
30601631 30601631 PRJEB12982_P_NODE_15553_length_175_cov_1.214286_g15390_i0 PRJEB12982 15553 175 1.214286 2.1250005 Blattamonas nauphoetae 2049346 Preaxostyla other_Eukaryota 58.9 4.44e-9   NR KAK2964230.1 2049346 g15390 i0 59.2 1.68 49 20 84 0 173 27 91 139 KAK2964230.1 putative 60S ribosomal protein L26-1 [Blattamonas nauphoetae] diamond 294 58.9 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida   Blattamonas Blattamonas nauphoetae
31360380 31360380 PRJEB12982_P_NODE_17536_length_166_cov_0.871795_g17373_i0 PRJEB12982 17536 166 0.871795 1.4471797 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 51.6 2.5e-6   NR KAJ3438462.1 1746091 g17373 i0 42.6 2.92771084337349 54 31 97.6 0 5 166 40 93 KAJ3438462.1 nuclear nucleic acid-binding protein c1d [Anaeramoeba flamelloides] diamond 486 51.6 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
31961160 31961160 PRJEB12982_P_NODE_8478_length_246_cov_1.060914_g8315_i0 PRJEB12982 8478 246 1.060914 2.60984844 Blattamonas nauphoetae 2049346 Preaxostyla other_Eukaryota 68.9 1.05e-12   NR KAK2962684.1 2049346 g8315 i0 42.9 1.91463414634146 77 43 93.9 1 1 231 51 126 KAK2962684.1 putative 60S ribosomal protein L31 [Blattamonas nauphoetae] diamond 471 68.9 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida   Blattamonas Blattamonas nauphoetae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;