contig_metadata
6 rows where bioproject = "PRJEB12366" and tax_phylum = "Cyanobacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6398944 | 6398944 | PRJEB12366_S_NODE_4066_length_153_cov_11.991525_g4058_i0 | PRJEB12366 | 4066 | 153 | 11.991525 | 18.34703325 | Aliterella chasmolithica | 2739056 | Bacteria | Bacteria | 255 | 8.900000000000001e-64 | NTclustered | gi|1713066352|gb|MN243145.1| | 2599943 | g4058 | i0 | 96.732 | 126.803921568627 | 153 | 5 | 100 | 0 | 1 | 153 | 2119 | 1967 | Aliterella chasmolithica PJ S15 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 19401 | 255 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Aliterellaceae | Aliterella | Aliterella chasmolithica | |
| 16597540 | 16597540 | PRJEB12366_P_NODE_12994_length_202_cov_1.089820_g12804_i0 | PRJEB12366 | 12994 | 202 | 1.08982 | 2.2014364 | uncultured Chroococcidiopsis sp. | 259957 | Bacteria | Bacteria | 309 | 9.45e-80 | NTclustered | gi|225696188|gb|FJ805855.1| | 259957 | g12804 | i0 | 94.5 | 136.138613861386 | 200 | 11 | 99 | 0 | 3 | 202 | 3205 | 3006 | Uncultured Chroococcidiopsis sp. clone AR2_2 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 27500 | 309 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | uncultured Chroococcidiopsis sp. | |
| 16597545 | 16597545 | PRJEB12366_P_NODE_13754_length_194_cov_1.509434_g13564_i0 | PRJEB12366 | 13754 | 194 | 1.509434 | 2.92830196 | uncultured Chroococcidiopsis sp. | 259957 | Bacteria | Bacteria | 318 | 1.5e-82 | NTclustered | gi|225696188|gb|FJ805855.1| | 259957 | g13564 | i0 | 96.373 | 202.618556701031 | 193 | 7 | 99 | 0 | 2 | 194 | 1783 | 1591 | Uncultured Chroococcidiopsis sp. clone AR2_2 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 39308 | 318 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | uncultured Chroococcidiopsis sp. | |
| 19146318 | 19146318 | PRJEB12366_S_NODE_2556_length_171_cov_2.316176_g2548_i0 | PRJEB12366 | 2556 | 171 | 2.316176 | 3.96066096 | Chroococcidiopsis sp. CCMEE 010 | 2941234 | Bacteria | Bacteria | 211 | 2.23e-50 | NTclustered | gi|2594665719|gb|OR413562.1| | 2941234 | g2548 | i0 | 92.053 | 37.8245614035088 | 151 | 11 | 88 | 1 | 1 | 150 | 2490 | 2340 | Chroococcidiopsis sp. CCMEE 010 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 6468 | 211 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | Chroococcidiopsis sp. CCMEE 010 | |
| 24246599 | 24246599 | PRJEB12366_P_NODE_6640_length_311_cov_3.173913_g6450_i0 | PRJEB12366 | 6640 | 311 | 3.173913 | 9.87086943 | Annamia dubia | 2815909 | Bacteria | Bacteria | 104 | 7.91e-18 | NTclustered | gi|2663421582|dbj|AP025630.1| | 2759045 | g6450 | i0 | 76.699 | 7.5016077170418 | 206 | 36 | 64 | 10 | 4 | 203 | 2054606 | 2054805 | Annamia dubia NIES-4383 DNA, complete genome | blastn | 2333 | 104 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcales | Geminocystaceae | Annamia | Annamia dubia | |
| 29938344 | 29938344 | PRJEB12366_P_NODE_13911_length_193_cov_1.012658_g13721_i0 | PRJEB12366 | 13911 | 193 | 1.012658 | 1.95442994 | Planktothrix sp. FACHB-1355 | 2692854 | Bacteria | Bacteria | 114 | 1.4e-31 | NR | WP_191055919.1 | 2692854 | g13721 | i0 | 84.2 | 1.78756476683938 | 57 | 9 | 88.6 | 0 | 2 | 172 | 15 | 71 | WP_191055919.1 MbtH family protein [Planktothrix sp. FACHB-1355] | diamond | 345 | 114 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Microcoleaceae | Planktothrix | Planktothrix sp. FACHB-1355 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;