RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJEB12366", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB12366 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26836969 26836969 PRJEB12366_P_NODE_18461_length_160_cov_0.952000_g18271_i0 PRJEB12366 18461 160 0.952 1.5232 Eukaryota 2759 Fungi Fungi 67 3.04e-12   NR KAJ1676418.1 68401 g18271 i0 62.3 11.49375 53 20 99.4 0 1 159 32 84 KAJ1676418.1 hypothetical protein EV182_008228, partial [Spiromyces aspiralis] diamond 1839 67 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Spiromyces Spiromyces aspiralis
29079481 29079481 PRJEB12366_P_NODE_16008_length_176_cov_1.702128_g15818_i0 PRJEB12366 16008 176 1.702128 2.99574528 Fungi 4751 Fungi Fungi 53.9 2.5e-7   NR RKP24118.1 1712513 g15818 i0 43.9 2.86363636363636 57 32 97.2 0 174 4 55 111 RKP24118.1 OSCP/delta subunit of ATPase, partial [Syncephalis pseudoplumigaleata] diamond 504 54.3 0.992633517495396 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Piptocephalidaceae Syncephalis Syncephalis pseudoplumigaleata
32271419 32271419 PRJEB12366_P_NODE_20258_length_150_cov_2.086957_g20068_i0 PRJEB12366 20258 150 2.086957 3.1304355 Fungi 4751 Fungi Fungi 90.9 2.5000000000000002e-22   NR ORX88884.1 1314790 g20068 i0 81.6 10.86 49 9 98 0 150 4 22 70 ORX88884.1 60S ribosomal protein L37 [Basidiobolus meristosporus CBS 931.73] diamond 1629 90.9 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus meristosporus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;