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contig_metadata

11 rows where bioproject = "PRJEB12366", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 11 ✖

tax_clade 1

  • Sar · 11 ✖

bioproject 1

  • PRJEB12366 · 11 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
985670 985670 PRJEB12366_S_NODE_461_length_246_cov_6.317536_g453_i0 PRJEB12366 461 246 6.317536 15.54113856 Paracercomonas 372085 SAR_Eukaryotes SAR_Eukaryotes 442 1.1299999999999995e-119   NTclustered gi|262262832|gb|FJ790725.1| 466266 g453 i0 99.587 98.4186991869919 242 1 98 0 5 246 755 996 Paracercomonas crassicauda strain ATCC 50316 18S ribosomal RNA gene, partial sequence blastn 24211 442 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas crassicauda
1295002 1295002 PRJEB12366_P_NODE_5042_length_370_cov_4.119403_g4852_i0 PRJEB12366 5042 370 4.119403 15.2417911 Lotharella vacuolata 74820 SAR_Eukaryotes SAR_Eukaryotes 259 1.93e-64   NTclustered gi|290760484|gb|GQ144687.1| 74820 g4852 i0 87.281 87.8378378378378 228 27 61 2 1 227 2796 2570 Lotharella vacuolata large subunit ribosomal RNA gene, partial sequence blastn 32500 259 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Lotharella Lotharella vacuolata
3847025 3847025 PRJEB12366_S_NODE_1444_length_199_cov_2.957317_g1436_i0 PRJEB12366 1444 199 2.957317 5.88506083 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 89.8 1.32e-13   NTclustered gi|756877536|ref|NC_026310.1| 372086 g1436 i0 98.039 0.256281407035176 51 1 26 0 72 122 1518 1568 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 51 89.8 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
3847027 3847027 PRJEB12366_S_NODE_164_length_342_cov_61.667752_g156_i0 PRJEB12366 164 342 61.667752 210.90371184 Paracercomonas crassicauda 466266 SAR_Eukaryotes SAR_Eukaryotes 632 9.079999999999999e-177   NTclustered gi|262262832|gb|FJ790725.1| 466266 g156 i0 100 98.7485380116959 342 0 100 0 1 342 42 383 Paracercomonas crassicauda strain ATCC 50316 18S ribosomal RNA gene, partial sequence blastn 33772 632 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas crassicauda
5123206 5123206 PRJEB12366_S_NODE_2065_length_180_cov_1.496552_g2057_i0 PRJEB12366 2065 180 1.496552 2.6937936 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 178 2.41e-40   NTclustered gi|756877536|ref|NC_026310.1| 372086 g2057 i0 85.714 0.933333333333333 168 24 93 0 10 177 1706 1873 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 168 178 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
9913804 9913804 PRJEB12366_P_NODE_13648_length_195_cov_1.650000_g13458_i0 PRJEB12366 13648 195 1.65 3.2175 Sandona 1239209 SAR_Eukaryotes SAR_Eukaryotes 355 1.15e-93   NTclustered gi|219524776|gb|EU709139.1| 175275 g13458 i0 99.487 100 195 1 100 0 1 195 779 973 Uncultured cercozoan isolate AH44p81t12 18S ribosomal RNA gene, partial sequence blastn 19500 355 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
12774430 12774430 PRJEB12366_S_NODE_351_length_265_cov_34.791304_g343_i0 PRJEB12366 351 265 34.791304 92.1969556 Cercomonas sp. 1979794 SAR_Eukaryotes SAR_Eukaryotes 128 3.91e-25   NTclustered gi|2651357794|gb|PP174308.1| 1979794 g343 i0 82.278 68.9169811320755 158 19 59 7 63 219 3830 3681 Cercomonas sp. isolate JGP5 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 18263 128 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp.
14048860 14048860 PRJEB12366_P_NODE_14632_length_187_cov_1.381579_g14442_i0 PRJEB12366 14632 187 1.381579 2.58355273 Sandona mutans 563755 SAR_Eukaryotes SAR_Eukaryotes 346 6.56e-91   NTclustered gi|224996445|gb|FJ654277.1| 563755 g14442 i0 100 99.9786096256685 187 0 100 0 1 187 624 438 Cercozoa sp. ATCC50314p145at3 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 18696 346 1 Eukaryota Sar   Cercozoa   Glissomonadida Sandonidae Sandona Sandona mutans
14048932 14048932 PRJEB12366_S_NODE_692_length_227_cov_6.838542_g684_i0 PRJEB12366 692 227 6.838542 15.52349034 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 230 8.699999999999997e-56   NTclustered gi|88792583|gb|DQ386164.1| 372086 g684 i0 87.94 47.6563876651982 199 19 87 5 31 227 472 277 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 10818 230 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
16597614 16597614 PRJEB12366_S_NODE_2434_length_173_cov_2.623188_g2426_i0 PRJEB12366 2434 173 2.623188 4.53811524 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 259 7.98e-65   NTclustered gi|88792583|gb|DQ386164.1| 372086 g2426 i0 93.678 2.36994219653179 174 10 100 1 1 173 2709 2536 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 410 259 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
22972796 22972796 PRJEB12366_S_NODE_2099_length_179_cov_8.291667_g2091_i0 PRJEB12366 2099 179 8.291667 14.84208393 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 298 1.76e-76   NTclustered gi|88792583|gb|DQ386164.1| 372086 g2091 i0 99.39 92.463687150838 164 1 92 0 16 179 1372 1535 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 16551 298 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;