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contig_metadata

4 rows where bioproject = "PRJEB12366", tax_clade = "Opisthokonta" and tax_phylum = "Chytridiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 4 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 4 ✖

bioproject 1

  • PRJEB12366 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3536247 3536247 PRJEB12366_P_NODE_10003_length_239_cov_37.931373_g9813_i0 PRJEB12366 10003 239 37.931373 90.65598147 root 1 Root_unresolved Root_unresolved 442 1.0899999999999994e-119   NTclustered gi|1866582754|gb|MT730929.1| 64517 g9813 i0 100 100.004184100418 239 0 100 0 1 239 1391 1629 Rhizophlyctis rosea isolate KP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 23901 442 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
12464785 12464785 PRJEB12366_P_NODE_350_length_1389_cov_78.433530_g34_i1 PRJEB12366 350 1389 78.43353 1089.4417317 Fungi 4751 Fungi Fungi 534 1.16e-146   NTclustered gi|1866582759|gb|MT730934.1| 64517 g34 i1 92.493 26.7307415406767 373 28 27 0 1 373 3674 3302 Rhizophlyctis rosea isolate KP37 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 37129 534 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
22972757 22972757 PRJEB12366_P_NODE_2819_length_514_cov_9.488518_g2634_i0 PRJEB12366 2819 514 9.488518 48.77098252 Synchytrium microbalum 1806994 Fungi Fungi 431 5.53e-116   NTclustered gi|1759145969|ref|XM_031167831.1| 1806994 g2634 i0 85.106 84.7762645914397 423 61 82 2 93 514 1966 2387 Synchytrium microbalum uncharacterized protein (SmJEL517_g01903), partial mRNA blastn 43575 431 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum
31100791 31100791 PRJEB12366_P_NODE_10455_length_233_cov_1.186869_g10265_i0 PRJEB12366 10455 233 1.186869 2.76540477 Nowakowskiella 109880 Fungi Fungi 74.3 6.69e-14   NR KAJ1559479.1 2732417 g10265 i0 46.8 1.98283261802575 79 38 96.6 1 226 2 152 230 KAJ1559479.1 hypothetical protein HK096_000452, partial [Nowakowskiella sp. JEL0078] diamond 462 74.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Nowakowskiellaceae Nowakowskiella Nowakowskiella sp. JEL0078

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;