contig_metadata
5 rows where bioproject = "PRJEB12366" and tax_clade = "Amoebozoa"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5123120 | 5123120 | PRJEB12366_P_NODE_12545_length_206_cov_40.602339_g12355_i0 | PRJEB12366 | 12545 | 206 | 40.602339 | 83.64081834 | Cochliopodium minutoidum | 703020 | Discosea | other_Eukaryota | 270 | 4.569999999999999e-68 | NTclustered | gi|659103920|gb|KJ569722.1| | 703020 | g12355 | i0 | 93.407 | 77.1359223300971 | 182 | 12 | 88 | 0 | 1 | 182 | 2045 | 1864 | Cochliopodium minutoidum clone 1308 18S ribosomal RNA gene, partial sequence | blastn | 15890 | 270 | 1 | Eukaryota | Amoebozoa | Discosea | Himatismenida | Cochliopodiidae | Cochliopodium | Cochliopodium minutoidum | |||
| 10223519 | 10223519 | PRJEB12366_P_NODE_14749_length_186_cov_1.470199_g14559_i0 | PRJEB12366 | 14749 | 186 | 1.470199 | 2.73457014 | Entamoeba invadens | 33085 | Evosea | other_Eukaryota | 222 | 1.15e-53 | NTclustered | gi|471215015|ref|XM_004261636.1| | 370355 | g14559 | i0 | 88.298 | 98.8118279569892 | 188 | 18 | 100 | 3 | 1 | 186 | 42 | 227 | Entamoeba invadens IP1 actin, putative (EIN_249970) mRNA, partial cds | blastn | 18379 | 222 | 1 | Eukaryota | Amoebozoa | Evosea | Mastigamoebida | Entamoebidae | Entamoeba | Entamoeba invadens | |||
| 12774390 | 12774390 | PRJEB12366_P_NODE_19771_length_153_cov_1.127119_g19581_i0 | PRJEB12366 | 19771 | 153 | 1.127119 | 1.72449207 | Heterostelium album | 2086695 | Evosea | other_Eukaryota | 124 | 2.62e-24 | NTclustered | gi|1160555578|ref|XM_020573614.1| | 670386 | g19581 | i0 | 82.069 | 11.8039215686275 | 145 | 26 | 95 | 0 | 9 | 153 | 987 | 843 | Polysphondylium pallidum PN500 actin partial mRNA | blastn | 1806 | 124 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Acytosteliales | Acytosteliaceae | Heterostelium | Heterostelium album | ||
| 17872372 | 17872372 | PRJEB12366_P_NODE_1695_length_662_cov_4.840510_g1540_i0 | PRJEB12366 | 1695 | 662 | 4.84051 | 32.0441762 | Dictyostelium discoideum | 44689 | Evosea | other_Eukaryota | 508 | 3.25e-139 | NTclustered | gi|66804872|ref|XM_631077.1| | 352472 | g1540 | i0 | 84.023 | 80.3625377643504 | 532 | 81 | 80 | 4 | 133 | 662 | 21 | 550 | Dictyostelium discoideum AX4 hypothetical protein (act1) mRNA, complete cds | blastn | 53200 | 508 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Dictyosteliaceae | Dictyostelium | Dictyostelium discoideum | ||
| 19146244 | 19146244 | PRJEB12366_P_NODE_12936_length_202_cov_2.365269_g12746_i0 | PRJEB12366 | 12936 | 202 | 2.365269 | 4.77784338 | Acytostelium subglobosum | 361139 | Evosea | other_Eukaryota | 58.4 | 3.78e-4 | NTclustered | gi|831780295|ref|XM_012900533.1| | 1410327 | g12746 | i0 | 100 | 1.27227722772277 | 31 | 0 | 15 | 0 | 80 | 110 | 100 | 70 | Acytostelium subglobosum LB1 hypothetical protein partial mRNA | blastn | 257 | 58.4 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Acytosteliales | Acytosteliaceae | Acytostelium | Acytostelium subglobosum |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;