contig_metadata
12 rows where bioproject = "PRJEB12296" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3846939 | 3846939 | PRJEB12296_P_NODE_304_length_229_cov_35.190000_g291_i0 | PRJEB12296 | 304 | 229 | 35.19 | 80.5851 | Cetobacterium somerae | 188913 | Bacteria | Bacteria | 364 | 2.309999999999999e-96 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g291 | i0 | 98.551 | 428.109170305677 | 207 | 2 | 90 | 1 | 1 | 206 | 1318782 | 1318988 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 98037 | 364 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 25606825 | 25606825 | PRJEB12296_S_NODE_17_length_1101_cov_18.607880_g13_i0 | PRJEB12296 | 17 | 1101 | 18.60788 | 204.8727588 | Cetobacterium | 180162 | Bacteria | Bacteria | 1953 | 0 | NTclustered | gi|2865368125|gb|CP122294.1| | 188913 | g13 | i0 | 98.64 | 518.94732061762 | 1103 | 13 | 100 | 2 | 1 | 1101 | 278631 | 279733 | Cetobacterium somerae strain MSU41 plasmid p41_t2, complete sequence | blastn | 571361 | 1953 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 25636475 | 25636475 | PRJEB12296_S_NODE_1266_length_340_cov_12184.544262_g1234_i0 | PRJEB12296 | 1266 | 340 | 12184.544262 | 41427.4504908 | Leptotrichia buccalis C-1 | 40542 | Bacteria | Bacteria | 490 | 5.74e-134 | NTclustered | gi|257048753|gb|CP001685.1| | 523794 | g1234 | i0 | 98.214 | 399.847058823529 | 280 | 5 | 82 | 0 | 61 | 340 | 265932 | 265653 | Leptotrichia buccalis DSM 1135, complete genome | blastn | 135948 | 490 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 25878786 | 25878786 | PRJEB12296_S_NODE_1171_length_348_cov_17541.753994_g1139_i0 | PRJEB12296 | 1171 | 348 | 17541.753994 | 61045.30389912 | Cetobacterium | 180162 | Bacteria | Bacteria | 490 | 5.89e-134 | NTclustered | gi|2865368125|gb|CP122294.1| | 188913 | g1139 | i0 | 100 | 411.505747126437 | 265 | 0 | 76 | 0 | 13 | 277 | 280514 | 280778 | Cetobacterium somerae strain MSU41 plasmid p41_t2, complete sequence | blastn | 143204 | 490 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 25878829 | 25878829 | PRJEB12296_S_NODE_27_length_1004_cov_19.347781_g13_i1 | PRJEB12296 | 27 | 1004 | 19.347781 | 194.25172124 | Cetobacterium | 180162 | Bacteria | Bacteria | 1541 | 0 | NTclustered | gi|2865368125|gb|CP122294.1| | 188913 | g13 | i1 | 95.473 | 483.888446215139 | 972 | 33 | 96 | 10 | 39 | 1004 | 278767 | 279733 | Cetobacterium somerae strain MSU41 plasmid p41_t2, complete sequence | blastn | 485824 | 1541 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 25878840 | 25878840 | PRJEB12296_S_NODE_4443_length_220_cov_30.708108_g4411_i0 | PRJEB12296 | 4443 | 220 | 30.708108 | 67.5578376 | Leptotrichia | 32067 | Bacteria | Bacteria | 370 | 4.74e-98 | NTclustered | gi|470484715|ref|NR_076664.1| | 40542 | g4411 | i0 | 99.507 | 243.781818181818 | 203 | 1 | 92 | 0 | 1 | 203 | 203 | 1 | Leptotrichia buccalis strain C-1013-b 23S ribosomal RNA gene, complete sequence | blastn | 53632 | 370 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 25908883 | 25908883 | PRJEB12296_S_NODE_1876_length_300_cov_7550.833962_g1844_i0 | PRJEB12296 | 1876 | 300 | 7550.833962 | 22652.501886 | Leptotrichia sp. HMT-225 | 3058373 | Bacteria | Bacteria | 438 | 1.8299999999999998e-118 | NTclustered | gi|2557559843|gb|CP130323.1| | 3058373 | g1844 | i0 | 99.583 | 204.066666666667 | 240 | 1 | 80 | 0 | 26 | 265 | 197217 | 196978 | Leptotrichia sp. HMT-225 chromosome, complete genome | blastn | 61220 | 438 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. HMT-225 | ||
| 26151261 | 26151261 | PRJEB12296_S_NODE_10717_length_170_cov_1.688889_g10685_i0 | PRJEB12296 | 10717 | 170 | 1.688889 | 2.8711113 | Cetobacterium | 180162 | Bacteria | Bacteria | 220 | 3.68e-53 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g10685 | i0 | 97.656 | 46.0764705882353 | 128 | 3 | 78 | 0 | 1 | 128 | 1814890 | 1815017 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 7833 | 220 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 26181161 | 26181161 | PRJEB12296_S_NODE_254_length_550_cov_385.149515_g232_i0 | PRJEB12296 | 254 | 550 | 385.149515 | 2118.3223325 | Cetobacterium somerae | 188913 | Bacteria | Bacteria | 865 | 0 | NTclustered | gi|2201062197|gb|CP092519.1| | 188913 | g232 | i0 | 98.768 | 436.978181818182 | 487 | 5 | 89 | 1 | 30 | 516 | 49354 | 48869 | Cetobacterium somerae strain CS2105-BJ chromosome, complete genome | blastn | 240338 | 865 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 26287295 | 26287295 | PRJEB12296_S_NODE_4942_length_212_cov_5134.790960_g4910_i0 | PRJEB12296 | 4942 | 212 | 5134.79096 | 10885.7568352 | Cetobacterium | 180162 | Bacteria | Bacteria | 191 | 3.79e-44 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g4910 | i0 | 95.041 | 23.0943396226415 | 121 | 6 | 57 | 0 | 57 | 177 | 1903119 | 1902999 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 4896 | 191 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 26559177 | 26559177 | PRJEB12296_S_NODE_12928_length_163_cov_81.062500_g12896_i0 | PRJEB12296 | 12928 | 163 | 81.0625 | 132.131875 | Cetobacterium | 180162 | Bacteria | Bacteria | 302 | 1.22e-77 | NTclustered | gi|2865368125|gb|CP122294.1| | 188913 | g12896 | i0 | 100 | 510 | 163 | 0 | 100 | 0 | 1 | 163 | 279821 | 279983 | Cetobacterium somerae strain MSU41 plasmid p41_t2, complete sequence | blastn | 83130 | 302 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 32993613 | 32993613 | PRJEB12296_S_NODE_4987_length_212_cov_1.949153_g4955_i0 | PRJEB12296 | 4987 | 212 | 1.949153 | 4.13220436 | unclassified Cetobacterium | 2630983 | Bacteria | Bacteria | 63.9 | 4.25e-11 | NR | WP_047381601.1 | 2630983 | g4955 | i0 | 98.2 | 0.792452830188679 | 56 | 1 | 79.2 | 0 | 211 | 44 | 37 | 92 | WP_047381601.1 MULTISPECIES: hypothetical protein [unclassified Cetobacterium] | diamond | 168 | 63.9 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;