RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB12296", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJEB12296 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25772682 25772682 PRJEB12296_S_NODE_1451_length_327_cov_4149.958904_g1419_i0 PRJEB12296 1451 327 4149.958904 13570.36561608 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 219 2.8599999999999993e-52   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g1419 i0 83.265 20.8868501529052 245 33 75 4 1 245 3495560 3495796 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 6830 219 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
26181209 26181209 PRJEB12296_S_NODE_406_length_486_cov_22.310421_g379_i0 PRJEB12296 406 486 22.310421 108.42864606 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 313 1.97e-80   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g379 i0 79.258 105.329218106996 458 87 93 8 11 463 3494870 3494416 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 51190 313 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;