contig_metadata
9 rows where bioproject = "PRJEB12296", tax_clade = "Sar" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25500706 | 25500706 | PRJEB12296_S_NODE_1985_length_296_cov_47.954023_g1953_i0 | PRJEB12296 | 1985 | 296 | 47.954023 | 141.94390808 | Aphanomyces stellatus | 120398 | SAR_Eukaryotes | SAR_Eukaryotes | 527 | 3.7499999999999984e-145 | NTclustered | gi|363498776|gb|JN662487.1| | 120398 | g1953 | i0 | 100 | 95.0945945945946 | 285 | 0 | 96 | 0 | 1 | 285 | 318 | 34 | Aphanomyces stellatus strain GF 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | blastn | 28148 | 527 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces stellatus | ||
| 25606891 | 25606891 | PRJEB12296_S_NODE_729_length_401_cov_9.795082_g698_i0 | PRJEB12296 | 729 | 401 | 9.795082 | 39.27827882 | Saprolegniales | 4763 | SAR_Eukaryotes | SAR_Eukaryotes | 697 | 0 | NTclustered | gi|50261276|ref|NC_005984.1| | 4770 | g698 | i0 | 98.01 | 109.650872817955 | 402 | 6 | 100 | 2 | 1 | 401 | 7455 | 7055 | Saprolegnia ferax mitochondrion, complete genome | blastn | 43970 | 701 | 0.994293865905849 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia ferax | ||
| 25772884 | 25772884 | PRJEB12296_S_NODE_923_length_373_cov_4.615385_g891_i0 | PRJEB12296 | 923 | 373 | 4.615385 | 17.21538605 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 505 | 2.2699999999999991e-138 | NTclustered | gi|698793876|ref|XR_717098.1| | 112090 | g891 | i0 | 92.837 | 86.9356568364611 | 349 | 24 | 94 | 1 | 25 | 373 | 1987 | 2334 | Aphanomyces astaci 28S ribosomal RNA rRNA | blastn | 32427 | 505 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 26151293 | 26151293 | PRJEB12296_S_NODE_2893_length_260_cov_4.924444_g2861_i0 | PRJEB12296 | 2893 | 260 | 4.924444 | 12.8035544 | Phytophthora | 4783 | SAR_Eukaryotes | SAR_Eukaryotes | 167 | 8.109999999999999e-37 | NTclustered | gi|301119740|ref|XM_002907552.1| | 403677 | g2861 | i0 | 80.93 | 68.4653846153846 | 215 | 38 | 82 | 3 | 27 | 239 | 455 | 242 | Phytophthora infestans T30-4 60S ribosomal protein L23a (PITG_02694), mRNA | blastn | 17801 | 167 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora infestans | ||
| 26181088 | 26181088 | PRJEB12296_S_NODE_13470_length_162_cov_1.244094_g13438_i0 | PRJEB12296 | 13470 | 162 | 1.244094 | 2.01543228 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 230 | 5.799999999999999e-56 | NTclustered | gi|1111669722|ref|NC_032051.1| | 112090 | g13438 | i0 | 94.04 | 105.20987654321 | 151 | 9 | 93 | 0 | 1 | 151 | 2296 | 2446 | Aphanomyces astaci isolate AP03 mitochondrion, complete genome | blastn | 17044 | 230 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 26181207 | 26181207 | PRJEB12296_S_NODE_3966_length_230_cov_1.415385_g3934_i0 | PRJEB12296 | 3966 | 230 | 1.415385 | 3.2553855 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 409 | 1.0600000000000001e-109 | NTclustered | gi|1111669722|ref|NC_032051.1| | 112090 | g3934 | i0 | 98.696 | 108.430434782609 | 230 | 3 | 100 | 0 | 1 | 230 | 2091 | 2320 | Aphanomyces astaci isolate AP03 mitochondrion, complete genome | blastn | 24939 | 409 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 26181334 | 26181334 | PRJEB12296_S_NODE_934_length_372_cov_4.902077_g902_i0 | PRJEB12296 | 934 | 372 | 4.902077 | 18.23572644 | Aphanomyces brasiliensis | 2525538 | SAR_Eukaryotes | SAR_Eukaryotes | 540 | 6.19e-149 | NTclustered | gi|2098511708|gb|OK235679.1| | 2525538 | g902 | i0 | 92.838 | 101.290322580645 | 377 | 19 | 100 | 6 | 1 | 372 | 939 | 566 | Aphanomyces brasiliensis voucher CCIBt4545 small subunit ribosomal RNA gene, partial sequence | blastn | 37680 | 540 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces brasiliensis | ||
| 33095953 | 33095953 | PRJEB12296_S_NODE_12294_length_165_cov_1.846154_g12262_i0 | PRJEB12296 | 12294 | 165 | 1.846154 | 3.0461541 | Aphanomyces cochlioides | 112091 | SAR_Eukaryotes | SAR_Eukaryotes | 55.1 | 1.97e-7 | NR | KAG9399323.1 | 112091 | g12262 | i0 | 68.2 | 0.8 | 44 | 12 | 76.4 | 1 | 1 | 126 | 127 | 170 | KAG9399323.1 hypothetical protein AC1031_011670 [Aphanomyces cochlioides] | diamond | 132 | 55.1 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces cochlioides | ||
| 33110081 | 33110081 | PRJEB12296_S_NODE_10670_length_170_cov_3.970370_g10638_i0 | PRJEB12296 | 10670 | 170 | 3.97037 | 6.749629 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 58.5 | 3.64e-8 | NR | XP_024573891.1 | 4781 | g10638 | i0 | 65.7 | 8.04705882352941 | 35 | 12 | 61.8 | 0 | 169 | 65 | 113 | 147 | XP_024573891.1 60s ribosomal protein l27a [Plasmopara halstedii] | diamond | 1368 | 58.9 | 0.99320882852292 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Plasmopara | Plasmopara halstedii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;