contig_metadata
12 rows where bioproject = "PRJEB12296" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25636705 | 25636705 | PRJEB12296_S_NODE_8890_length_178_cov_1.538462_g8858_i0 | PRJEB12296 | 8890 | 178 | 1.538462 | 2.73846236 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 243 | 8.33e-60 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g8858 | i0 | 92.899 | 64.3258426966292 | 169 | 9 | 94 | 3 | 12 | 178 | 2002481 | 2002314 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 11450 | 243 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 25636709 | 25636709 | PRJEB12296_S_NODE_9082_length_177_cov_1.612676_g9050_i0 | PRJEB12296 | 9082 | 177 | 1.612676 | 2.85443652 | Telmatocola sphagniphila | 1123043 | Bacteria | Bacteria | 226 | 8.329999999999998e-55 | NTclustered | gi|2041266541|gb|CP074694.1| | 1123043 | g9050 | i0 | 89.831 | 147.378531073446 | 177 | 16 | 99 | 2 | 1 | 176 | 3723819 | 3723994 | Telmatocola sphagniphila strain SP2T chromosome, complete genome | blastn | 26086 | 226 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Telmatocola | Telmatocola sphagniphila | |
| 25908796 | 25908796 | PRJEB12296_S_NODE_10684_length_170_cov_2.948148_g10652_i0 | PRJEB12296 | 10684 | 170 | 2.948148 | 5.0118516 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 195 | 2.23e-45 | NTclustered | gi|2921913114|gb|CP182803.1| | 2026777 | g10652 | i0 | 87.719 | 306.841176470588 | 171 | 15 | 99 | 6 | 2 | 169 | 1302409 | 1302576 | MAG: Phycisphaeraceae bacterium isolate amkv24 chromosome, complete genome | blastn | 52163 | 195 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 25909072 | 25909072 | PRJEB12296_S_NODE_9500_length_175_cov_2.335714_g9468_i0 | PRJEB12296 | 9500 | 175 | 2.335714 | 4.0874995 | Gemmata sp. SH-PL17 | 1630693 | Bacteria | Bacteria | 243 | 8.15e-60 | NTclustered | gi|1015440974|gb|CP011271.1| | 1630693 | g9468 | i0 | 91.573 | 35.6742857142857 | 178 | 12 | 100 | 3 | 1 | 175 | 558603 | 558426 | Gemmata sp. SH-PL17, complete genome | blastn | 6243 | 243 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata sp. SH-PL17 | |
| 26044970 | 26044970 | PRJEB12296_S_NODE_1669_length_313_cov_2973.967626_g1637_i0 | PRJEB12296 | 1669 | 313 | 2973.967626 | 9308.51866938 | Coraliomargarita algicola | 3092156 | Bacteria | Bacteria | 202 | 2.7499999999999996e-47 | NTclustered | gi|2623481368|gb|CP138858.1| | 3092156 | g1637 | i0 | 83.71 | 52.3546325878594 | 221 | 28 | 70 | 7 | 96 | 313 | 2458486 | 2458701 | Coraliomargarita algicola strain J2-16 chromosome, complete genome | blastn | 16387 | 202 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Puniceicoccales | Coraliomargaritaceae | Coraliomargarita | Coraliomargarita algicola | |
| 26045099 | 26045099 | PRJEB12296_S_NODE_5413_length_206_cov_1.087719_g5381_i0 | PRJEB12296 | 5413 | 206 | 1.087719 | 2.24070114 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 248 | 2.14e-61 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g5381 | i0 | 90.476 | 217.932038834951 | 189 | 16 | 91 | 2 | 18 | 204 | 2003310 | 2003122 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 44894 | 248 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 26045154 | 26045154 | PRJEB12296_S_NODE_7821_length_184_cov_2.006711_g7789_i0 | PRJEB12296 | 7821 | 184 | 2.006711 | 3.69234824 | Limnoglobus roseus | 2598579 | Bacteria | Bacteria | 198 | 1.9e-46 | NTclustered | gi|1733446852|gb|CP042425.1| | 2598579 | g7789 | i0 | 87.006 | 30.9184782608696 | 177 | 21 | 96 | 2 | 9 | 184 | 2958889 | 2958714 | Limnoglobus roseus strain PX52 chromosome, complete genome | blastn | 5689 | 198 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Limnoglobus | Limnoglobus roseus | |
| 26151297 | 26151297 | PRJEB12296_S_NODE_325_length_515_cov_16.729167_g298_i0 | PRJEB12296 | 325 | 515 | 16.729167 | 86.15521005 | Synoicihabitans | 2892920 | Bacteria | Bacteria | 388 | 3.38e-103 | NTclustered | gi|2891482117|emb|OZ219851.1| | 2026772 | g298 | i0 | 82.403 | 69.2 | 466 | 62 | 88 | 19 | 25 | 476 | 1410589 | 1410130 | MAG: Opitutales bacterium isolate e4292735-b3b5-42df-bce3-ad3ef7a88f44 genome assembly, chromosome: 10 | blastn | 35638 | 388 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutales bacterium | |||
| 26287266 | 26287266 | PRJEB12296_S_NODE_2462_length_275_cov_160.741667_g2430_i0 | PRJEB12296 | 2462 | 275 | 160.741667 | 442.03958425 | Planctomycetaceae | 126 | Bacteria | Bacteria | 230 | 1.0899999999999995e-55 | NTclustered | gi|1712652806|gb|CP036281.1| | 2528007 | g2430 | i0 | 86.829 | 41.5890909090909 | 205 | 27 | 75 | 0 | 50 | 254 | 1415677 | 1415473 | Polystyrenella longa strain Pla110 chromosome, complete genome | blastn | 11437 | 230 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Polystyrenella | Polystyrenella longa | |
| 26453301 | 26453301 | PRJEB12296_S_NODE_6976_length_190_cov_2.754839_g6944_i0 | PRJEB12296 | 6976 | 190 | 2.754839 | 5.2341941 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 261 | 2.49e-65 | NTclustered | gi|2874253757|emb|OY969698.1| | 100233 | g6944 | i0 | 94.643 | 18.1526315789474 | 168 | 9 | 88 | 0 | 1 | 168 | 4422720 | 4422887 | MAG: uncultured Planctomycetaceae bacterium isolate MFD00082.bin.2.56 genome assembly, chromosome: 1 | blastn | 3449 | 261 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 26453308 | 26453308 | PRJEB12296_S_NODE_7272_length_188_cov_1.470588_g7240_i0 | PRJEB12296 | 7272 | 188 | 1.470588 | 2.76470544 | uncultured verrucomicrobium HF | 723594 | Bacteria | Bacteria | 183 | 5.4799999999999996e-42 | NTclustered | gi|297170473|gb|GU567957.1| | 723594 | g7240 | i0 | 86.127 | 298.595744680851 | 173 | 20 | 91 | 4 | 18 | 188 | 15606 | 15436 | Uncultured verrucomicrobium HF0070_15G23 genomic sequence | blastn | 56136 | 183 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured verrucomicrobium HF0070_15G23 | |||||
| 32942388 | 32942388 | PRJEB12296_S_NODE_6418_length_195_cov_2.456250_g6386_i0 | PRJEB12296 | 6418 | 195 | 2.45625 | 4.7896875 | Planctomycetes bacterium SM23_25 | 1704028 | Bacteria | Bacteria | 42.4 | 0.0278 | NR | KPK50769.1 | 1704028 | g6386 | i0 | 56.3 | 0.492307692307692 | 32 | 14 | 49.2 | 0 | 147 | 52 | 358 | 389 | KPK50769.1 MAG: hypothetical protein AMK72_01325 [Planctomycetes bacterium SM23_25] | diamond | 96 | 42.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetes bacterium SM23_25 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;