RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB12296", tax_clade = "Opisthokonta" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJEB12296 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32925175 32925175 PRJEB12296_S_NODE_5161_length_209_cov_4.258621_g5129_i0 PRJEB12296 5161 209 4.258621 8.90051789 Syncephalis fuscata 1851187 Fungi Fungi 44.3 0.00257   NR KAI9597338.1 1851187 g5129 i0 41.3 0.660287081339713 46 27 66 0 195 58 86 131 KAI9597338.1 cofilin [Syncephalis fuscata] diamond 138 44.3 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Piptocephalidaceae Syncephalis Syncephalis fuscata
33044703 33044703 PRJEB12296_S_NODE_15021_length_158_cov_5.178862_g14989_i0 PRJEB12296 15021 158 5.178862 8.18260196 Coemansia brasiliensis 2650707 Fungi Fungi 43.1 0.00601   NR KAJ2848156.1 2650707 g14989 i0 61.1 2.73417721518987 36 14 68.4 0 51 158 60 95 KAJ2848156.1 hypothetical protein IWW36_003466, partial [Coemansia brasiliensis] diamond 432 43.1 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Coemansia Coemansia brasiliensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;