contig_metadata
13 rows where bioproject = "PRJEB12237", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11188923 | 11188923 | PRJEB12237_P_NODE_3089_length_387_cov_3.250000_g2893_i0 | PRJEB12237 | 3089 | 387 | 3.25 | 12.5775 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 95.5 | 4.409999999999999e-23 | NR | MCD6280016.1 | 2026735 | g2893 | i0 | 67.1 | 4.27131782945736 | 70 | 19 | 54.3 | 1 | 122 | 331 | 4 | 69 | MCD6280016.1 cold-shock protein [Deltaproteobacteria bacterium] | diamond | 1653 | 95.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 17872313 | 17872313 | PRJEB12237_P_NODE_4015_length_323_cov_1.347222_g3819_i0 | PRJEB12237 | 4015 | 323 | 1.347222 | 4.35152706 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 146 | 2.33e-39 | NR | MBI1947140.1 | 2026735 | g3819 | i0 | 66.7 | 6 | 108 | 35 | 99.4 | 1 | 3 | 323 | 225 | 332 | MBI1947140.1 NADP-dependent isocitrate dehydrogenase [Deltaproteobacteria bacterium] | diamond | 1938 | 147 | 0.993197278911565 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 20421343 | 20421343 | PRJEB12237_P_NODE_3617_length_347_cov_1.381410_g3421_i0 | PRJEB12237 | 3617 | 347 | 1.38141 | 4.7934927 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 215 | 3.92e-66 | NR | WP_146654455.1 | 1391654 | g3421 | i0 | 92.1 | 94.8155619596542 | 114 | 9 | 98.6 | 0 | 345 | 4 | 292 | 405 | WP_146654455.1 NADP-dependent isocitrate dehydrogenase [Labilithrix luteola] | diamond | 32901 | 216 | 0.99537037037037 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 26716029 | 26716029 | PRJEB12237_P_NODE_8921_length_182_cov_1.088435_g8725_i0 | PRJEB12237 | 8921 | 182 | 1.088435 | 1.9809517 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 45.8 | 0.00103 | NR | MBK8215412.1 | 2026763 | g8725 | i0 | 43.4 | 2.75274725274725 | 53 | 24 | 87.4 | 1 | 176 | 18 | 155 | 201 | MBK8215412.1 glutathione S-transferase family protein [Myxococcales bacterium] | diamond | 501 | 45.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 26937916 | 26937916 | PRJEB12237_P_NODE_9602_length_173_cov_1.391304_g9406_i0 | PRJEB12237 | 9602 | 173 | 1.391304 | 2.40695592 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 42.7 | 0.0146 | NR | MAO83026.1 | 2026763 | g9406 | i0 | 42.9 | 0.84971098265896 | 49 | 25 | 85 | 2 | 16 | 162 | 16 | 61 | MAO83026.1 hypothetical protein [Myxococcales bacterium] | diamond | 147 | 42.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 27222421 | 27222421 | PRJEB12237_P_NODE_10963_length_159_cov_2.258065_g10767_i0 | PRJEB12237 | 10963 | 159 | 2.258065 | 3.59032335 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 65.1 | 1.58e-10 | NR | MBN2845406.1 | 2026735 | g10767 | i0 | 63.3 | 3.69811320754717 | 49 | 16 | 92.5 | 1 | 159 | 13 | 443 | 489 | MBN2845406.1 hydroxylamine reductase [Deltaproteobacteria bacterium] | diamond | 588 | 65.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 27816621 | 27816621 | PRJEB12237_P_NODE_9444_length_175_cov_1.414286_g9248_i0 | PRJEB12237 | 9444 | 175 | 1.414286 | 2.4750005 | Archangiaceae | 39 | Bacteria | Bacteria | 98.6 | 3.23e-22 | NR | WP_083967961.1 | 394096 | g9248 | i0 | 78.6 | 8.70857142857143 | 56 | 12 | 96 | 0 | 1 | 168 | 578 | 633 | WP_083967961.1 peptidoglycan-binding protein [Hyalangium minutum] | diamond | 1524 | 98.6 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Hyalangium | Hyalangium minutum | ||
| 28448077 | 28448077 | PRJEB12237_P_NODE_10946_length_160_cov_0.952000_g10750_i0 | PRJEB12237 | 10946 | 160 | 0.952 | 1.5232 | Nannocystis | 53 | Bacteria | Bacteria | 68.2 | 1.09e-11 | NR | HEY0134472.1 | 1962667 | g10750 | i0 | 62.7 | 2.86875 | 51 | 19 | 95.6 | 0 | 155 | 3 | 228 | 278 | HEY0134472.1 TauD/TfdA family dioxygenase [Nannocystis sp.] | diamond | 459 | 68.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Nannocystales | Nannocystaceae | Nannocystis | Nannocystis sp. | |||
| 28927797 | 28927797 | PRJEB12237_P_NODE_9468_length_175_cov_1.135714_g9272_i0 | PRJEB12237 | 9468 | 175 | 1.135714 | 1.9874995 | Stigmatella erecta | 83460 | Bacteria | Bacteria | 50.4 | 2.8e-5 | NR | WP_143076215.1 | 83460 | g9272 | i0 | 37.7 | 3.36 | 69 | 30 | 96 | 3 | 7 | 174 | 148 | 216 | WP_143076215.1 hypothetical protein [Stigmatella erecta] | diamond | 588 | 50.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella erecta | ||
| 29079476 | 29079476 | PRJEB12237_P_NODE_6328_length_230_cov_1.876923_g6132_i0 | PRJEB12237 | 6328 | 230 | 1.876923 | 4.3169229 | root | 1 | Root_unresolved | Root_unresolved | 78.6 | 2.77e-15 | NR | TNE49017.1 | 2026735 | g6132 | i0 | 49.3 | 6.83478260869565 | 75 | 36 | 97.8 | 1 | 225 | 1 | 46 | 118 | TNE49017.1 MAG: alpha/beta hydrolase [Deltaproteobacteria bacterium] | diamond | 1572 | 79.3 | 0.991172761664565 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 30664906 | 30664906 | PRJEB12237_P_NODE_1373_length_616_cov_2.528399_g1204_i0 | PRJEB12237 | 1373 | 616 | 2.528399 | 15.57493784 | Myxococcaceae bacterium | 2484252 | Bacteria | Bacteria | 179 | 4.81e-53 | NR | HLT31923.1 | 2484252 | g1204 | i0 | 49.7 | 2.63961038961039 | 187 | 91 | 91.1 | 2 | 614 | 54 | 19 | 202 | HLT31923.1 glutathione binding-like protein [Myxococcaceae bacterium] | diamond | 1626 | 179 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcaceae bacterium | |||
| 31391982 | 31391982 | PRJEB12237_P_NODE_6516_length_225_cov_2.494737_g6320_i0 | PRJEB12237 | 6516 | 225 | 2.494737 | 5.61315825 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 67 | 4.08e-12 | NR | HZF54429.1 | 2268199 | g6320 | i0 | 46.9 | 2.52 | 64 | 34 | 85.3 | 0 | 5 | 196 | 61 | 124 | HZF54429.1 hypothetical protein [Polyangiaceae bacterium] | diamond | 567 | 67 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 31423412 | 31423412 | PRJEB12237_P_NODE_11016_length_159_cov_1.290323_g10820_i0 | PRJEB12237 | 11016 | 159 | 1.290323 | 2.05161357 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 84.7 | 2.65e-19 | NR | MEZ4441762.1 | 2268199 | g10820 | i0 | 71.2 | 0.981132075471698 | 52 | 15 | 98.1 | 0 | 156 | 1 | 58 | 109 | MEZ4441762.1 DUF962 domain-containing protein [Polyangiaceae bacterium] | diamond | 156 | 84.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;