RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB12237" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB12237 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28921353 28921353 PRJEB12237_P_NODE_11308_length_156_cov_2.206612_g11112_i0 PRJEB12237 11308 156 2.206612 3.44231472 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 60.5 1.35e-9   NR KAG9392544.1 201153 g11112 i0 61.4 4.17307692307692 44 17 84.6 0 1 132 121 164 KAG9392544.1 Ribosomal protein L11/L12 [Carpediemonas membranifera] diamond 651 60.8 0.995065789473684 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
31834447 31834447 PRJEB12237_P_NODE_4917_length_279_cov_1.475410_g4721_i0 PRJEB12237 4917 279 1.47541 4.1163939 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 72.4 1.61e-13   NR KAG9392754.1 201153 g4721 i0 42 0.946236559139785 88 50 93.5 1 267 7 37 124 KAG9392754.1 Translationally controlled tumor protein [Carpediemonas membranifera] diamond 264 72.4 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;