contig_metadata
18 rows where bioproject = "PRJEB12237", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6398820 | 6398820 | PRJEB12237_P_NODE_5686_length_248_cov_2.488263_g5490_i0 | PRJEB12237 | 5686 | 248 | 2.488263 | 6.17089224 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 281 | 2.63e-71 | NTclustered | gi|1958093598|gb|CP065003.1| | 1978231 | g5490 | i0 | 87.097 | 81.6008064516129 | 248 | 32 | 100 | 0 | 1 | 248 | 318951 | 318704 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.185_cln chromosome, complete genome | blastn | 20237 | 281 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 8947697 | 8947697 | PRJEB12237_P_NODE_8408_length_189_cov_1.051948_g8212_i0 | PRJEB12237 | 8408 | 189 | 1.051948 | 1.98818172 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 283 | 5.28e-72 | NTclustered | gi|76574293|gb|DQ139441.1| | 171953 | g8212 | i0 | 93.651 | 102.666666666667 | 189 | 12 | 100 | 0 | 1 | 189 | 671 | 859 | Uncultured Acidobacteria bacterium clone CAL1 23S ribosomal RNA gene, partial sequence | blastn | 19404 | 283 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 11498720 | 11498720 | PRJEB12237_P_NODE_6150_length_235_cov_2.310000_g5954_i0 | PRJEB12237 | 6150 | 235 | 2.31 | 5.4285 | Paludibaculum fermentans | 1473598 | Bacteria | Bacteria | 324 | 4.04e-84 | NTclustered | gi|1929489624|gb|CP063849.1| | 1473598 | g5954 | i0 | 91.525 | 58.8 | 236 | 19 | 100 | 1 | 1 | 235 | 4786173 | 4785938 | Paludibaculum fermentans strain P105 chromosome, complete genome | blastn | 13818 | 324 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Paludibaculum | Paludibaculum fermentans | ||
| 11498731 | 11498731 | PRJEB12237_P_NODE_7330_length_207_cov_2.029070_g7134_i0 | PRJEB12237 | 7330 | 207 | 2.02907 | 4.2001749 | Paludibaculum fermentans | 1473598 | Bacteria | Bacteria | 265 | 2.1399999999999997e-66 | NTclustered | gi|1929489624|gb|CP063849.1| | 1473598 | g7134 | i0 | 90.64 | 240.811594202899 | 203 | 13 | 98 | 5 | 1 | 202 | 4785874 | 4785677 | Paludibaculum fermentans strain P105 chromosome, complete genome | blastn | 49848 | 265 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Paludibaculum | Paludibaculum fermentans | ||
| 19146150 | 19146150 | PRJEB12237_P_NODE_10496_length_163_cov_3.078125_g10300_i0 | PRJEB12237 | 10496 | 163 | 3.078125 | 5.01734375 | Paludibaculum fermentans | 1473598 | Bacteria | Bacteria | 257 | 2.68e-64 | NTclustered | gi|1929489624|gb|CP063849.1| | 1473598 | g10300 | i0 | 95.092 | 108.41717791411 | 163 | 8 | 100 | 0 | 1 | 163 | 4784767 | 4784929 | Paludibaculum fermentans strain P105 chromosome, complete genome | blastn | 17672 | 257 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Paludibaculum | Paludibaculum fermentans | ||
| 20421366 | 20421366 | PRJEB12237_P_NODE_8517_length_187_cov_2.078947_g8321_i0 | PRJEB12237 | 8517 | 187 | 2.078947 | 3.88763089 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 202 | 1.4999999999999996e-47 | NTclustered | gi|1958085512|gb|CP065000.1| | 1978231 | g8321 | i0 | 86.316 | 12.7593582887701 | 190 | 21 | 100 | 4 | 1 | 187 | 3298172 | 3298359 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome | blastn | 2386 | 202 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 26868674 | 26868674 | PRJEB12237_P_NODE_2661_length_430_cov_1.716456_g2465_i0 | PRJEB12237 | 2661 | 430 | 1.716456 | 7.3807608 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 59.3 | 4.29e-7 | NR | MBX3265733.1 | 1978231 | g2465 | i0 | 34.8 | 1.3046511627907 | 89 | 52 | 59.3 | 4 | 354 | 100 | 146 | 232 | MBX3265733.1 hypothetical protein [Acidobacteriota bacterium] | diamond | 561 | 59.7 | 0.993299832495812 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 27032932 | 27032932 | PRJEB12237_P_NODE_9682_length_172_cov_1.459854_g9486_i0 | PRJEB12237 | 9682 | 172 | 1.459854 | 2.51094888 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 47 | 4.62e-4 | NR | NNF01029.1 | 2283092 | g9486 | i0 | 48.7 | 1.90116279069767 | 39 | 20 | 68 | 0 | 171 | 55 | 366 | 404 | NNF01029.1 hypothetical protein [Pyrinomonadaceae bacterium] | diamond | 327 | 47 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 27949034 | 27949034 | PRJEB12237_P_NODE_3085_length_387_cov_4.221591_g2889_i0 | PRJEB12237 | 3085 | 387 | 4.221591 | 16.33755717 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 125 | 1.42e-34 | NR | MDQ7008653.1 | 1978231 | g2889 | i0 | 83.8 | 0.62015503875969 | 80 | 13 | 62 | 0 | 146 | 385 | 24 | 103 | MDQ7008653.1 NFYB/HAP3 family transcription factor subunit [Acidobacteriota bacterium] | diamond | 240 | 125 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 29085838 | 29085838 | PRJEB12237_P_NODE_6008_length_239_cov_1.568627_g5812_i0 | PRJEB12237 | 6008 | 239 | 1.568627 | 3.74901853 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 70.9 | 4.43e-13 | NR | HSE24404.1 | 2283092 | g5812 | i0 | 52.9 | 0.853556485355649 | 68 | 32 | 85.4 | 0 | 237 | 34 | 103 | 170 | HSE24404.1 globin family protein [Pyrinomonadaceae bacterium] | diamond | 204 | 70.9 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 29338331 | 29338331 | PRJEB12237_P_NODE_10349_length_165_cov_1.230769_g10153_i0 | PRJEB12237 | 10349 | 165 | 1.230769 | 2.03076885 | Blastocatellia bacterium | 2052146 | Bacteria | Bacteria | 53.9 | 7.63e-7 | NR | HQR39838.1 | 2052146 | g10153 | i0 | 52.3 | 0.8 | 44 | 21 | 80 | 0 | 163 | 32 | 73 | 116 | HQR39838.1 hypothetical protein [Blastocatellia bacterium] | diamond | 132 | 53.9 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellia bacterium | |||||
| 29748462 | 29748462 | PRJEB12237_P_NODE_9111_length_179_cov_1.666667_g8915_i0 | PRJEB12237 | 9111 | 179 | 1.666667 | 2.98333393 | Terriglobia bacterium | 2081523 | Bacteria | Bacteria | 54.3 | 1.29e-6 | NR | MBV8732832.1 | 2081523 | g8915 | i0 | 42.4 | 0.988826815642458 | 59 | 31 | 98.9 | 2 | 3 | 179 | 125 | 180 | MBV8732832.1 hypothetical protein [Terriglobia bacterium] | diamond | 177 | 54.3 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobia bacterium | |||||
| 29780295 | 29780295 | PRJEB12237_P_NODE_2011_length_504_cov_2.400853_g1823_i0 | PRJEB12237 | 2011 | 504 | 2.400853 | 12.10029912 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 107 | 1.13e-26 | NR | MDQ7008654.1 | 1978231 | g1823 | i0 | 86.8 | 0.404761904761905 | 68 | 8 | 40.5 | 1 | 504 | 301 | 45 | 111 | MDQ7008654.1 hypothetical protein [Acidobacteriota bacterium] | diamond | 204 | 107 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 30089772 | 30089772 | PRJEB12237_P_NODE_9452_length_175_cov_1.300000_g9256_i0 | PRJEB12237 | 9452 | 175 | 1.3 | 2.275 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 47.4 | 3.55e-4 | NR | HKQ62042.1 | 2910585 | g9256 | i0 | 59.5 | 3.41142857142857 | 37 | 15 | 63.4 | 0 | 111 | 1 | 600 | 636 | HKQ62042.1 metallophosphoesterase [Candidatus Polarisedimenticolaceae bacterium] | diamond | 597 | 47.4 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Candidatus Polarisedimenticolia | Candidatus Polarisedimenticolales | Candidatus Polarisedimenticolaceae | Candidatus Polarisedimenticolaceae bacterium | |||
| 30886062 | 30886062 | PRJEB12237_P_NODE_3094_length_387_cov_1.715909_g2898_i0 | PRJEB12237 | 3094 | 387 | 1.715909 | 6.64056783 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 101 | 5.38e-25 | NR | MDQ7008653.1 | 1978231 | g2898 | i0 | 83.1 | 0.503875968992248 | 65 | 11 | 50.4 | 0 | 222 | 28 | 45 | 109 | MDQ7008653.1 NFYB/HAP3 family transcription factor subunit [Acidobacteriota bacterium] | diamond | 195 | 101 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 31992808 | 31992808 | PRJEB12237_P_NODE_5078_length_272_cov_1.518987_g4882_i0 | PRJEB12237 | 5078 | 272 | 1.518987 | 4.13164464 | Blastocatellia bacterium | 2052146 | Bacteria | Bacteria | 69.7 | 9.02e-12 | NR | MFN7928494.1 | 2052146 | g4882 | i0 | 45.1 | 2.00735294117647 | 91 | 36 | 99.3 | 3 | 3 | 272 | 173 | 250 | MFN7928494.1 pirin family protein [Blastocatellia bacterium] | diamond | 546 | 69.7 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellia bacterium | |||||
| 32246285 | 32246285 | PRJEB12237_P_NODE_12158_length_150_cov_1.391304_g11962_i0 | PRJEB12237 | 12158 | 150 | 1.391304 | 2.086956 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 95.1 | 3.6100000000000005e-21 | NR | MCB1042508.1 | 1978231 | g11962 | i0 | 75.5 | 4.9 | 49 | 12 | 98 | 0 | 149 | 3 | 291 | 339 | MCB1042508.1 acetate--CoA ligase [Acidobacteriota bacterium] | diamond | 735 | 95.1 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 32782593 | 32782593 | PRJEB12237_P_NODE_3200_length_376_cov_1.768328_g3004_i0 | PRJEB12237 | 3200 | 376 | 1.768328 | 6.64891328 | Acidobacteriaceae bacterium | 2052142 | Bacteria | Bacteria | 89.4 | 2.57e-18 | NR | MDR3737318.1 | 2052142 | g3004 | i0 | 44.8 | 0.997340425531915 | 125 | 61 | 95.7 | 4 | 362 | 3 | 186 | 307 | MDR3737318.1 hypothetical protein [Acidobacteriaceae bacterium] | diamond | 375 | 89.4 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Acidobacteriaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;