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contig_metadata

17 rows where bioproject = "PRJEB12237", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 17 ✖

tax_kingdom 1

  • Metazoa · 17 ✖

tax_clade 1

bioproject 1

  • PRJEB12237 · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20659 20659 PRJEB12237_P_NODE_11741_length_153_cov_1.355932_g11545_i0 PRJEB12237 11741 153 1.355932 2.07457596 Diplogasteroides magnus 560213 Nematoda Nematoda 106 9.49e-19   NTclustered gi|256709249|gb|GQ422277.1| 560213 g11545 i0 84.906 7.64705882352941 106 14 69 2 46 150 45 149 Diplogasteroides magnus small subunit ribosomal protein 14 (rps-14) mRNA, partial cds blastn 1170 106 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Diplogasteroididae Diplogasteroides Diplogasteroides magnus
5123074 5123074 PRJEB12237_P_NODE_4905_length_279_cov_4.717213_g4709_i0 PRJEB12237 4905 279 4.717213 13.16102427 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 87.4 1.23e-18   NR TKR80874.1 34508 g4709 i0 58.2 5.35483870967742 67 28 72 0 276 76 177 243 TKR80874.1 hypothetical protein L596_014863 [Steinernema carpocapsae] diamond 1494 88.2 0.99092970521542 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
22972672 22972672 PRJEB12237_P_NODE_5079_length_272_cov_1.468354_g4883_i0 PRJEB12237 5079 272 1.468354 3.99392288 Terschellingia longicaudata 319962 Nematoda Nematoda 117 8.73e-22   NTclustered gi|1172206953|emb|LT703373.1| 319962 g4883 i0 80.625 58.7573529411765 160 22 58 7 113 271 696 847 Terschellingia longicaudata partial 18S rRNA gene, isolate 1620_Amon_V blastn 15982 117 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Monhysterida Linhomoeidae Terschellingia Terschellingia longicaudata
26684671 26684671 PRJEB12237_P_NODE_3861_length_331_cov_1.486486_g3665_i0 PRJEB12237 3861 331 1.486486 4.92026866 Meloidogyne graminicola 189291 Nematoda Nematoda 51.2 9.14e-5   NR AVZ46778.1 189291 g3665 i0 29.5 0.797583081570997 88 62 79.8 0 271 8 117 204 AVZ46778.1 hypothetical protein [Meloidogyne graminicola] diamond 264 51.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
27222423 27222423 PRJEB12237_P_NODE_1463_length_596_cov_3.647059_g1289_i0 PRJEB12237 1463 596 3.647059 21.73647164 Meloidogyne graminicola 189291 Nematoda Nematoda 70.9 8.79e-11   NR AVZ46778.1 189291 g1289 i0 53.2 0.38758389261745 77 36 38.8 0 20 250 170 246 AVZ46778.1 hypothetical protein [Meloidogyne graminicola] diamond 231 70.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
27317642 27317642 PRJEB12237_P_NODE_9083_length_180_cov_0.937931_g8887_i0 PRJEB12237 9083 180 0.937931 1.6882758 Soboliphyme baturini 241478 Nematoda Nematoda 54.3 7.65e-8   NR VDP11718.1 241478 g8887 i0 51.4 1.16666666666667 37 18 61.7 0 28 138 41 77 VDP11718.1 unnamed protein product [Soboliphyme baturini] diamond 210 54.3 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Dioctophymatida Soboliphymatidae Soboliphyme Soboliphyme baturini
27753461 27753461 PRJEB12237_P_NODE_10224_length_166_cov_1.473282_g10028_i0 PRJEB12237 10224 166 1.473282 2.44564812 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 86.7 6.6e-19   NR NP_507940.1 6239 g10028 i0 72.2 14.6204819277108 54 15 97.6 0 3 164 139 192 NP_507940.1 Large ribosomal subunit protein uL2 [Caenorhabditis elegans] diamond 2427 87.4 0.991990846681922 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
27917321 27917321 PRJEB12237_P_NODE_9225_length_178_cov_1.118881_g9029_i0 PRJEB12237 9225 178 1.118881 1.99160818 Trichuris trichiura 36087 Nematoda Nematoda 50.4 2.76e-5   NR CDW59512.1 36087 g9029 i0 41.4 0.97752808988764 58 32 94.4 1 170 3 7 64 CDW59512.1 Peptidase C1 domain containing protein [Trichuris trichiura] diamond 174 50.4 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris trichiura
28043746 28043746 PRJEB12237_P_NODE_9845_length_170_cov_1.903704_g9649_i0 PRJEB12237 9845 170 1.903704 3.2362968 Oesophagostomum dentatum 61180 Nematoda Nematoda 47.4 7.15e-5   NR KHJ81150.1 61180 g9649 i0 67.9 1.00588235294118 28 9 49.4 0 128 45 5 32 KHJ81150.1 zinc knuckle [Oesophagostomum dentatum] diamond 171 47.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongylidae Oesophagostomum Oesophagostomum dentatum
28327766 28327766 PRJEB12237_P_NODE_6946_length_216_cov_1.265193_g6750_i0 PRJEB12237 6946 216 1.265193 2.73281688 Auanema sp. JU1783 2878363 Nematoda Nematoda 48.5 1.61e-4   NR CAI4233146.1 2878363 g6750 i0 42.9 0.680555555555556 49 28 68.1 0 172 26 146 194 CAI4233146.1 unnamed protein product [Auanema sp. JU1783] diamond 147 48.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Auanema Auanema sp. JU1783
28612117 28612117 PRJEB12237_P_NODE_8847_length_183_cov_1.074324_g8651_i0 PRJEB12237 8847 183 1.074324 1.96601292 Bursaphelenchus xylophilus 6326 Nematoda Nematoda 72 7.81e-13   NR CAD5225918.1 6326 g8651 i0 61.5 1.75409836065574 52 20 85.2 0 182 27 980 1031 CAD5225918.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 321 72 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
28991275 28991275 PRJEB12237_P_NODE_3268_length_371_cov_2.214286_g3072_i0 PRJEB12237 3268 371 2.214286 8.21500106 Acanthocheilonema viteae 6277 Nematoda Nematoda 97.1 1.58e-20   NR VBB29199.1 6277 g3072 i0 64.5 0.501347708894879 62 22 50.1 0 356 171 59 120 VBB29199.1 unnamed protein product [Acanthocheilonema viteae] diamond 186 97.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Acanthocheilonema Acanthocheilonema viteae
30127508 30127508 PRJEB12237_P_NODE_3372_length_363_cov_3.460366_g3176_i0 PRJEB12237 3372 363 3.460366 12.56112858 Pristionchus fissidentatus 1538716 Nematoda Nematoda 128 9.3e-36   NR GMT14341.1 1538716 g3176 i0 65.6 1.52892561983471 93 31 76.9 1 345 67 7 98 GMT14341.1 hypothetical protein PFISCL1PPCAC_5638, partial [Pristionchus fissidentatus] diamond 555 128 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus
30254461 30254461 PRJEB12237_P_NODE_9072_length_180_cov_1.103448_g8876_i0 PRJEB12237 9072 180 1.103448 1.9862064 Caenorhabditis elegans 6239 Nematoda Nematoda 50.8 2.17e-5   NR 6K00_A 6239 g8876 i0 53.1 0.816666666666667 49 23 81.7 0 7 153 259 307 6K00_A Chain A, Nucleosome Assembly Protein [Caenorhabditis elegans] diamond 147 50.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
31296870 31296870 PRJEB12237_P_NODE_10235_length_166_cov_1.221374_g10039_i0 PRJEB12237 10235 166 1.221374 2.02748084 Haemonchus contortus 6289 Nematoda Nematoda 77.8 2.63e-15   NR XGW26292.1 6289 g10039 i0 57.1 32.9819277108434 63 19 99.4 1 166 2 37 99 XGW26292.1 hypothetical protein V3C99_007145 [Haemonchus contortus] diamond 5475 77.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Haemonchus Haemonchus contortus
32246288 32246288 PRJEB12237_P_NODE_6038_length_238_cov_2.147783_g5842_i0 PRJEB12237 6038 238 2.147783 5.11172354 Meloidogyne graminicola 189291 Nematoda Nematoda 47.4 7.56e-4   NR AVZ46778.1 189291 g5842 i0 52.3 0.554621848739496 44 21 55.5 0 100 231 117 160 AVZ46778.1 hypothetical protein [Meloidogyne graminicola] diamond 132 47.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
32650225 32650225 PRJEB12237_P_NODE_4260_length_310_cov_2.003636_g4064_i0 PRJEB12237 4260 310 2.003636 6.2112716 Metazoa 33208 Nematoda Nematoda 143 3.28e-37   NR TKR77856.1 34508 g4064 i0 74.3 51 101 26 97.7 0 305 3 766 866 TKR77856.1 hypothetical protein L596_018757 [Steinernema carpocapsae] diamond 15810 143 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;