RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB12237", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB12237 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29274955 29274955 PRJEB12237_P_NODE_2169_length_482_cov_1.599553_g1980_i0 PRJEB12237 2169 482 1.599553 7.70984546 Rozella allomycis CSF55 988480 Fungi Fungi 57.8 4.27e-7   NR EPZ36564.1 988480 g1980 i0 62.2 0.591286307053942 45 16 28 1 2 136 106 149 EPZ36564.1 Nascent polypeptide-associated complex subunit beta [Rozella allomycis CSF55] diamond 285 57.8 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
31512238 31512238 PRJEB12237_P_NODE_7896_length_197_cov_1.481481_g7700_i0 PRJEB12237 7896 197 1.481481 2.91851757 Eukaryota 2759 Fungi Fungi 77.4 3.14e-15   NR EPZ34692.1 988480 g7700 i0 65.1 4.62944162436548 63 21 94.4 1 187 2 190 252 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 912 77.8 0.994858611825193 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;